The evolution of insect biodiversity

E Tihelka, C Cai, M Giacomelli, J Lozano-Fernandez… - Current Biology, 2021 - cell.com
Insects comprise over half of all described animal species. Together with the Protura
(coneheads), Collembola (springtails) and Diplura (two-pronged bristletails), insects form …

Current understanding on the Cambrian Explosion: questions and answers

X Zhang, D Shu - PalZ, 2021 - Springer
Abstract The Cambrian Explosion by nature is a three-phased explosion of animal body
plans alongside episodic biomineralization, pulsed change of generic diversity, body size …

AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination

TC Terwilliger, D Liebschner, TI Croll, CJ Williams… - Nature …, 2024 - nature.com
Artificial intelligence-based protein structure prediction methods such as AlphaFold have
revolutionized structural biology. The accuracies of these predictions vary, however, and …

Revisiting metazoan phylogeny with genomic sampling of all phyla

CE Laumer, R Fernández, S Lemer… - … of the royal …, 2019 - royalsocietypublishing.org
Proper biological interpretation of a phylogeny can sometimes hinge on the placement of
key taxa—or fail when such key taxa are not sampled. In this light, we here present the first …

Evidence for sponges as sister to all other animals from partitioned phylogenomics with mixture models and recoding

AK Redmond, A McLysaght - Nature communications, 2021 - nature.com
Resolving the relationships between the major lineages in the animal tree of life is
necessary to understand the origin and evolution of key animal traits. Sponges …

Genome structure-based Juglandaceae phylogenies contradict alignment-based phylogenies and substitution rates vary with DNA repair genes

YM Ding, XX Pang, Y Cao, WP Zhang… - Nature …, 2023 - nature.com
In lineages of allopolyploid origin, sets of homoeologous chromosomes may coexist that
differ in gene content and syntenic structure. Presence or absence of genes and …

[HTML][HTML] The origin of land plants is rooted in two bursts of genomic novelty

AMC Bowles, U Bechtold, J Paps - Current Biology, 2020 - cell.com
Over the last 470 Ma, plant evolution has seen major evolutionary transitions, such as the
move from water to land and the origins of vascular tissues, seeds, and flowers [1]. These …

ContScout: sensitive detection and removal of contamination from annotated genomes

B Bálint, Z Merényi, B Hegedüs, IV Grigoriev… - Nature …, 2024 - nature.com
Contamination of genomes is an increasingly recognized problem affecting several
downstream applications, from comparative evolutionary genomics to metagenomics. Here …

Comparative genomics and the nature of placozoan species

M Eitel, WR Francis, F Varoqueaux, J Daraspe… - PLoS …, 2018 - journals.plos.org
Placozoans are a phylum of nonbilaterian marine animals currently represented by a single
described species, Trichoplax adhaerens, Schulze 1883. Placozoans arguably show the …

Early animal evolution: a morphologist's view

C Nielsen - Royal Society open science, 2019 - royalsocietypublishing.org
Two hypotheses for the early radiation of the metazoans are vividly discussed in recent
phylogenomic studies, the 'Porifera-first'hypothesis, which places the poriferans as the sister …