A field guide to eukaryotic transposable elements

JN Wells, C Feschotte - Annual review of genetics, 2020 - annualreviews.org
Transposable elements (TEs) are mobile DNA sequences that propagate within genomes.
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …

Retrotransposons as regulators of gene expression

RA Elbarbary, BA Lucas, LE Maquat - Science, 2016 - science.org
BACKGROUND Genomes are subject to two types of changes: changes to the DNA
sequence, and changes that are epigenetic in nature. Changes to the DNA sequence can …

DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome

T Aktaş, İ Avşar Ilık, D Maticzka, V Bhardwaj… - Nature, 2017 - nature.com
Transposable elements are viewed as 'selfish genetic elements', yet they contribute to gene
regulation and genome evolution in diverse ways. More than half of the human genome …

Rfam 12.0: updates to the RNA families database

EP Nawrocki, SW Burge, A Bateman… - Nucleic acids …, 2015 - academic.oup.com
The Rfam database (available at http://rfam. xfam. org) is a collection of non-coding RNA
families represented by manually curated sequence alignments, consensus secondary …

Mammalian transposable elements and their impacts on genome evolution

RN Platt, MW Vandewege, DA Ray - Chromosome Research, 2018 - Springer
Transposable elements (TEs) are genetic elements with the ability to mobilize and replicate
themselves in a genome. Mammalian genomes are dominated by TEs, which can reach …

Repetitive DNA sequence detection and its role in the human genome

X Liao, W Zhu, J Zhou, H Li, X Xu, B Zhang… - Communications …, 2023 - nature.com
Repetitive DNA sequences playing critical roles in driving evolution, inducing variation, and
regulating gene expression. In this review, we summarized the definition, arrangement, and …

Evolution and diversity of transposable elements in vertebrate genomes

CG Sotero-Caio, RN Platt, A Suh… - Genome biology and …, 2017 - academic.oup.com
Transposable elements (TEs) are selfish genetic elements that mobilize in genomes via
transposition or retrotransposition and often make up large fractions of vertebrate genomes …

Active human retrotransposons: variation and disease

DC Hancks, HH Kazazian Jr - Current opinion in genetics & development, 2012 - Elsevier
Mobile DNAs, also known as transposons or 'jumping genes', are widespread in nature and
comprise an estimated 45% of the human genome. Transposons are divided into two …

The repetitive DNA content of eukaryotic genomes

I López-Flores, MA Garrido-Ramos - Repetitive DNA, 2012 - karger.com
Eukaryotic genomes are composed of both unique and repetitive DNA sequences. These
latter form families of different classes that may be organized in tandem or may be dispersed …

Transposable elements in Drosophila

V Mérel, M Boulesteix, M Fablet, C Vieira - Mobile DNA, 2020 - Springer
Drosophila has been studied as a biological model for many years and many discoveries in
biology rely on this species. Research on transposable elements (TEs) is not an exception …