TET (Ten-eleven translocation) family proteins: structure, biological functions and applications

X Zhang, Y Zhang, C Wang, X Wang - Signal Transduction and …, 2023 - nature.com
Ten-eleven translocation (TET) family proteins (TETs), specifically, TET1, TET2 and TET3,
can modify DNA by oxidizing 5-methylcytosine (5mC) iteratively to yield 5 …

TET Enzymes in the Immune system: from DNA demethylation to immunotherapy, inflammation, and cancer

IF López-Moyado, M Ko, PG Hogan… - Annual Review of …, 2024 - annualreviews.org
Ten-eleven translocation (TET) proteins are iron-dependent and α-ketoglutarate-dependent
dioxygenases that sequentially oxidize the methyl group of 5-methylcytosine (5mC) to 5 …

Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation

S Kaluscha, S Domcke, C Wirbelauer, MB Stadler… - Nature …, 2022 - nature.com
Cytosine methylation efficiently silences CpG-rich regulatory regions of genes and repeats
in mammalian genomes. To what extent this entails direct inhibition of transcription factor …

[HTML][HTML] Role of TET1-mediated epigenetic modulation in Alzheimer's disease

MJ Armstrong, Y Jin, SM Vattathil, Y Huang… - Neurobiology of …, 2023 - Elsevier
Alzheimer's disease (AD) is a neurodegenerative disorder influenced by a complex interplay
of environmental, epigenetic, and genetic factors. DNA methylation (5mC) and …

Inducible disruption of Tet genes results in myeloid malignancy, readthrough transcription, and a heterochromatin-to-euchromatin switch

H Yuita, IF López-Moyado, H Jeong… - Proceedings of the …, 2023 - National Acad Sciences
The three mammalian TET dioxygenases oxidize the methyl group of 5-methylcytosine in
DNA, and the oxidized methylcytosines are essential intermediates in all known pathways of …

Comprehensive chromatin proteomics resolves functional phases of pluripotency and identifies changes in regulatory components

E Ugur, A de la Porte, W Qin, S Bultmann… - Nucleic Acids …, 2023 - academic.oup.com
The establishment of cellular identity is driven by transcriptional and epigenetic regulators of
the chromatin proteome-the chromatome. Comprehensive analyses of the chromatome …

Drosophila TET acts with PRC1 to activate gene expression independently of its catalytic activity

G Gilbert, Y Renaud, C Teste, N Anglaret… - Science …, 2024 - science.org
Enzymes of the ten-eleven translocation (TET) family play a key role in the regulation of
gene expression by oxidizing 5-methylcytosine (5mC), a prominent epigenetic mark in many …

Dual functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation

BK van der Veer, L Chen, C Custers… - Nucleic Acids …, 2023 - academic.oup.com
Gastrulation begins when the epiblast forms the primitive streak or becomes definitive
ectoderm. During this lineage bifurcation, the DNA dioxygenase TET1 has bipartite functions …

Histone 4 lysine 20 tri-methylation: a key epigenetic regulator in chromatin structure and disease

A Agredo, AL Kasinski - Frontiers in Genetics, 2023 - frontiersin.org
Chromatin is a vital and dynamic structure that is carefully regulated to maintain proper cell
homeostasis. A great deal of this regulation is dependent on histone proteins which have the …

Memory effects of prior subculture may impact the quality of multiomic perturbation profiles

P Bortel, G Hagn, L Skos, A Bileck… - Proceedings of the …, 2024 - pnas.org
Mass spectrometry-based omics technologies are increasingly used in perturbation studies
to map drug effects to biological pathways by identifying significant molecular events …