[HTML][HTML] Visualizing and trapping transient oligomers in amyloid assembly pathways

EE Cawood, TK Karamanos, AJ Wilson… - Biophysical chemistry, 2021 - Elsevier
Oligomers which form during amyloid fibril assembly are considered to be key contributors
towards amyloid disease. However, understanding how such intermediates form, their …

Integration of mass spectrometry data for structural biology

HM Britt, T Cragnolini, K Thalassinos - Chemical Reviews, 2021 - ACS Publications
Mass spectrometry (MS) is increasingly being used to probe the structure and dynamics of
proteins and the complexes they form with other macromolecules. There are now several …

A simple cross-linking/mass spectrometry workflow for studying system-wide protein interactions

M Götze, C Iacobucci, CH Ihling, A Sinz - Analytical chemistry, 2019 - ACS Publications
We present a cross-linking/mass spectrometry workflow for performing proteome-wide cross-
linking analyses within 1 week. The workflow is based on the commercially available mass …

Reliable identification of protein-protein interactions by crosslinking mass spectrometry

S Lenz, LR Sinn, FJ O'Reilly, L Fischer… - Nature …, 2021 - nature.com
Protein-protein interactions govern most cellular pathways and processes, and multiple
technologies have emerged to systematically map them. Assessing the error of interaction …

PyXlinkViewer: A flexible tool for visualization of protein chemical crosslinking data within the PyMOL molecular graphics system

B Schiffrin, SE Radford, DJ Brockwell… - Protein …, 2020 - Wiley Online Library
Chemical crosslinking‐mass spectrometry (XL‐MS) is a valuable technique for gaining
insights into protein structure and the organization of macromolecular complexes. XL‐MS …

An Efficient Diazirine‐Based Four‐Armed Cross‐linker for Photo‐patterning of Polymeric Semiconductors

C Wu, C Li, X Yu, L Chen, C Gao, X Zhang… - Angewandte …, 2021 - Wiley Online Library
A diazirine‐based four‐armed cross‐linker (4CNN) with a tetrahedron geometry is
presented for efficient patterning of polymeric semiconductors by photo‐induced carbene …

Emerging applications of aryl trifluoromethyl diazoalkanes and diazirines in synthetic transformations

T Ollevier, V Carreras - ACS Organic & Inorganic Au, 2022 - ACS Publications
Aryl trifluoromethyl diazoalkanes and diazirines have become unique as reactants in
synthetic methodology. As privileged compounds containing CF3 groups and ease of …

Inter-domain dynamics in the chaperone SurA and multi-site binding to its outer membrane protein clients

AN Calabrese, B Schiffrin, M Watson… - Nature …, 2020 - nature.com
The periplasmic chaperone SurA plays a key role in outer membrane protein (OMP)
biogenesis. E. coli SurA comprises a core domain and two peptidylprolyl isomerase …

The Application of Fluorine‐Containing Reagents in Structural Proteomics

M Cheng, C Guo, ML Gross - … Chemie International Edition, 2020 - Wiley Online Library
Structural proteomics refers to large‐scale mapping of protein structures in order to
understand the relationship between protein sequence, structure, and function. Chemical …

Designing chimeric molecules for drug discovery by leveraging chemical biology

C Borsari, DJ Trader, A Tait… - Journal of medicinal …, 2020 - ACS Publications
After the first seed concept introduced in the 18th century, different disciplines have
attributed different names to dual-functional molecules depending on their application …