Electrostatic interactions in protein structure, folding, binding, and condensation

HX Zhou, X Pang - Chemical reviews, 2018 - ACS Publications
Charged and polar groups, through forming ion pairs, hydrogen bonds, and other less
specific electrostatic interactions, impart important properties to proteins. Modulation of the …

Theory, practice, and applications of paramagnetic relaxation enhancement for the characterization of transient low-population states of biological macromolecules …

GM Clore, J Iwahara - Chemical reviews, 2009 - ACS Publications
Understanding the function of biological macromolecules and their complexes at the
physicochemical level requires knowledge of both their structure and dynamics …

Fundamental aspects of protein− protein association kinetics

G Schreiber, G Haran, HX Zhou - Chemical reviews, 2009 - ACS Publications
The structure of a protein complex together with information about its affinity and other
thermodynamic characteristics provide a “frozen” view of the complex. This picture ignores …

[HTML][HTML] The courtship of proteins: understanding the encounter complex

M Ubbink - FEBS letters, 2009 - Elsevier
The formation of protein complexes involves an encounter complex, in which proteins show
few specific interactions and assume many orientations. Recent kinetic and structural …

[PDF][PDF] Paramagnetic tagging for protein structure and dynamics analysis

PHJ Keizers, M Ubbink - Progress in nuclear magnetic resonance …, 2011 - researchgate.net
Molecules containing unpaired electrons affect the magnetic properties of nuclei in their
vicinity, which is observable in Nuclear Magnetic Resonance (NMR) spectra. As these …

[HTML][HTML] The structure of the cytochrome P450cam–putidaredoxin complex determined by paramagnetic NMR spectroscopy and crystallography

Y Hiruma, MAS Hass, Y Kikui, WM Liu, B Ölmez… - Journal of molecular …, 2013 - Elsevier
Cytochrome P450cam catalyzes the hydroxylation of camphor in a complex process
involving two electron transfers (ETs) from the iron-sulfur protein putidaredoxin. The …

A model of the membrane-bound cytochrome b5-cytochrome P450 complex from NMR and mutagenesis data

S Ahuja, N Jahr, SC Im, S Vivekanandan… - Journal of Biological …, 2013 - ASBMB
Microsomal cytochrome b 5 (cytb 5) is a membrane-bound protein that modulates the
catalytic activity of its redox partner, cytochrome P4502B4 (cytP450). Here, we report the first …

[HTML][HTML] Diffusive intracellular interactions: On the role of protein net charge and functional adaptation

EV Estrada, N Zhang, H Wennerström… - Current opinion in …, 2023 - Elsevier
A striking feature of nucleic acids and lipid membranes is that they all carry net negative
charge and so is true for the majority of intracellular proteins. It is suggested that the role of …

Transient, sparsely populated compact states of apo and calcium-loaded calmodulin probed by paramagnetic relaxation enhancement: interplay of conformational …

NJ Anthis, M Doucleff, GM Clore - Journal of the American …, 2011 - ACS Publications
Calmodulin (CaM) is the universal calcium sensor in eukaryotes, regulating the function of
numerous proteins. Crystallography and NMR show that free CaM-4Ca2+ exists in an …

Visualization of the Encounter Ensemble of the Transient Electron Transfer Complex of Cytochrome c and Cytochrome c Peroxidase

Q Bashir, AN Volkov, GM Ullmann… - Journal of the American …, 2010 - ACS Publications
Recent studies have provided experimental evidence for the existence of an encounter
complex, a transient intermediate in the formation of protein complexes. We use …