Intragenomic rDNA variation-the product of concerted evolution, mutation, or something in between?

W Wang, X Zhang, S Garcia, AR Leitch, A Kovařík - Heredity, 2023 - nature.com
The classical model of concerted evolution states that hundreds to thousands of ribosomal
DNA (rDNA) units undergo homogenization, making the multiple copies of the individual …

Role of pseudogenes in tumorigenesis

X Hu, L Yang, YY Mo - Cancers, 2018 - mdpi.com
Functional genomics has provided evidence that the human genome transcribes a large
number of non-coding genes in addition to protein-coding genes, including microRNAs and …

Evolutionary trends in animal ribosomal DNA loci: introduction to a new online database

J Sochorová, S Garcia, F Gálvez, R Symonová… - Chromosoma, 2018 - Springer
Ribosomal DNA (rDNA) loci encoding 5S and 45S (18S-5.8 S-28S) rRNAs are important
components of eukaryotic chromosomes. Here, we set up the animal rDNA database …

Regulation of RNA polymerase I transcription in development, disease, and aging

S Sharifi, H Bierhoff - Annual review of biochemistry, 2018 - annualreviews.org
Ribosome biogenesis is a complex and highly energy-demanding process that requires the
concerted action of all three nuclear RNA polymerases (Pol I–III) in eukaryotes. The three …

The role of micropeptides in biology

R Vitorino, S Guedes, F Amado, M Santos… - Cellular and Molecular …, 2021 - Springer
Micropeptides are small polypeptides coded by small open-reading frames. Progress in
computational biology and the analyses of large-scale transcriptomes and proteomes have …

The dynamic interplay between ribosomal DNA and transposable elements: a perspective from genomics and cytogenetics

S Garcia, A Kovarik, S Maiwald, L Mann… - Molecular Biology …, 2024 - academic.oup.com
Although both are salient features of genomes, at first glance ribosomal DNAs and
transposable elements are genetic elements with not much in common: whereas ribosomal …

Integrative rDNAomics—importance of the oldest repetitive fraction of the eukaryote genome

R Symonová - Genes, 2019 - mdpi.com
Nuclear ribosomal RNA (rRNA) genes represent the oldest repetitive fraction universal to all
eukaryotic genomes. Their deeply anchored universality and omnipresence during …

Evolving together: Cassandra retrotransposons gradually mirror promoter mutations of the 5S rRNA genes

S Maiwald, L Mann, S Garcia… - Molecular Biology and …, 2024 - academic.oup.com
The 5S rRNA genes are among the most conserved nucleotide sequences across all
species. Similar to the 5S preservation we observe the occurrence of 5S-related …

[PDF][PDF] Marcadores moleculares na era genômica: metodologias e aplicações

ACT Zolet, C Turchetto, CM Zanella, G Passaia - 2017 - lume.ufrgs.br
A arte da capa desta obra foi desenhada a mão livre por Daniela Quinsani, mestre em
Genética e Biologia Molecular (Programa de Pós-Graduação em Genética e Biologia …

Complete genome assembly provides a high‐quality skeleton for pan‐NLRome construction in melon

C Mo, H Wang, M Wei, Q Zeng, X Zhang, Z Fei… - The Plant …, 2024 - Wiley Online Library
SUMMARY Melon (Cucumis melo L.), being under intensive domestication and selective
breeding, displays an abundant phenotypic diversity. Wild germplasm with tolerance to …