Microbial diversity and ecological networks as indicators of environmental quality

B Karimi, PA Maron, N Chemidlin-Prevost Boure… - Environmental …, 2017 - Springer
Evaluating the quality of ecosystems in terms of biological patrimony and functioning is of
critical importance in the actual context of intensified human activities. Microbial diversity is …

Microbial assembly, interaction, functioning, activity and diversification: a review derived from community compositional data

J Liu, Z Meng, X Liu, XH Zhang - Marine Life Science & Technology, 2019 - Springer
Microorganisms play crucial roles in maintaining ecosystem stability. The last two decades
have witnessed an upsurge in studies on marine microbial community composition using …

Sinking particles promote vertical connectivity in the ocean microbiome

M Mestre, C Ruiz-González… - Proceedings of the …, 2018 - National Acad Sciences
The sinking of organic particles formed in the photic layer is a main vector of carbon export
into the deep ocean. Although sinking particles are heavily colonized by microbes, so far it …

Microbial community and geochemical analyses of trans-trench sediments for understanding the roles of hadal environments

S Hiraoka, M Hirai, Y Matsui, A Makabe… - The ISME …, 2020 - academic.oup.com
Hadal trench bottom (> 6000 m below sea level) sediments harbor higher microbial cell
abundance compared with adjacent abyssal plain sediments. This is supported by the …

Significant impacts of increasing aridity on the arid soil microbiome

JW Neilson, K Califf, C Cardona, A Copeland… - …, 2017 - Am Soc Microbiol
Global deserts occupy one-third of the Earth's surface and contribute significantly to organic
carbon storage, a process at risk in dryland ecosystems that are highly vulnerable to climate …

Nanoparticles and antibiotics stress proliferated antibiotic resistance genes in microalgae-bacteria symbiotic systems

M Cao, F Wang, B Zhou, H Chen, R Yuan, S Ma… - Journal of hazardous …, 2023 - Elsevier
The comprehensive effect of exogenous pollutants on the dispersal and abundance of
antibiotic-resistance genes (ARGs) in the phycosphere, bacterial community and algae …

Soil depth matters: shift in composition and inter-kingdom co-occurrence patterns of microorganisms in forest soils

S Mundra, OJ Kjønaas, LN Morgado… - FEMS Microbiology …, 2021 - academic.oup.com
Soil depth represents a strong physiochemical gradient that greatly affects soil-dwelling
microorganisms. Fungal communities are typically structured by soil depth, but how other …

The Exometabolome of Two Model Strains of the Roseobacter Group: A Marketplace of Microbial Metabolites

G Wienhausen, BE Noriega-Ortega… - Frontiers in …, 2017 - frontiersin.org
Recent studies applying Fourier transform ion cyclotron resonance mass spectrometry (FT-
ICR-MS) showed that the exometabolome of marine bacteria is composed of a surprisingly …

The antibiotic resistome of free-living and particle-attached bacteria under a reservoir cyanobacterial bloom

Y Guo, M Liu, L Liu, X Liu, H Chen, J Yang - Environment international, 2018 - Elsevier
In freshwater systems, both antibiotic resistance genes (ARGs) and cyanobacterial blooms
attract global public health concern. Cyanobacterial blooms can greatly impact bacterial …

Leaf and root endospheres harbor lower fungal diversity and less complex fungal co-occurrence patterns than rhizosphere

X Qian, H Li, Y Wang, B Wu, M Wu, L Chen… - Frontiers in …, 2019 - frontiersin.org
Plant-associated microbiomes are key determinants of host-plant fitness, productivity, and
function. However, compared to bacterial community, we still lack fundamental knowledge …