Phylogenomics and the flowering plant tree of life

C Guo, Y Luo, LM Gao, TS Yi, HT Li… - Journal of Integrative …, 2023 - Wiley Online Library
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …

Deep reticulation: the long legacy of hybridization in vascular plant evolution

GW Stull, KK Pham, PS Soltis, DE Soltis - The Plant Journal, 2023 - Wiley Online Library
Hybridization has long been recognized as a fundamental evolutionary process in plants
but, until recently, our understanding of its phylogenetic distribution and biological …

A comprehensive phylogenomic platform for exploring the angiosperm tree of life

WJ Baker, P Bailey, V Barber, A Barker… - Systematic …, 2022 - academic.oup.com
The tree of life is the fundamental biological roadmap for navigating the evolution and
properties of life on Earth, and yet remains largely unknown. Even angiosperms (flowering …

The origin and speciation of orchids

OA Pérez‐Escobar, D Bogarín… - New …, 2024 - Wiley Online Library
Orchids constitute one of the most spectacular radiations of flowering plants. However, their
origin, spread across the globe, and hotspots of speciation remain uncertain due to the lack …

Easy353: A tool to get Angiosperms353 genes for phylogenomic research

Z Zhang, P Xie, Y Guo, W Zhou, E Liu… - Molecular Biology and …, 2022 - academic.oup.com
The Angiosperms353 gene set (AGS) consists of a set of 353 universal low-copy nuclear
genes that were selected by examining more than 600 angiosperm species. These genes …

A plastid phylogenomic framework for the palm family (Arecaceae)

G Yao, YQ Zhang, C Barrett, B Xue, S Bellot, WJ Baker… - BMC biology, 2023 - Springer
Background Over the past decade, phylogenomics has greatly advanced our knowledge of
angiosperm evolution. However, phylogenomic studies of large angiosperm families with …

Comprehensive phylogenetic analyses of Orchidaceae using nuclear genes and evolutionary insights into epiphytism

G Zhang, Y Hu, MZ Huang, WC Huang… - Journal of Integrative …, 2023 - Wiley Online Library
Abstract Orchidaceae (with> 28,000 orchid species) are one of the two largest plant families,
with economically and ecologically important species, and occupy global and diverse niches …

Exploring Angiosperms353: An open, community toolkit for collaborative phylogenomic research on flowering plants

WJ Baker, S Dodsworth, F Forest, SW Graham… - 2021 - ttu-ir.tdl.org
The unveiling of the angiosperm (flowering plant) tree of life over the past three decades has
been one of the great success stories of modern plant biology. Flowering plants underpin …

Settling a family feud: A high‐level phylogenomic framework for the Gentianales based on 353 nuclear genes and partial plastomes

A Antonelli, JJ Clarkson, K Kainulainen… - American Journal of …, 2021 - Wiley Online Library
Premise Comprising five families that vastly differ in species richness—ranging from
Gelsemiaceae with 13 species to the Rubiaceae with 13,775 species—members of the …

Revised Species Delimitation in the Giant Water Lily Genus Victoria (Nymphaeaceae) Confirms a New Species and Has Implications for Its Conservation

LT Smith, C Magdalena, NAS Przelomska… - Frontiers in Plant …, 2022 - frontiersin.org
Reliably documenting plant diversity is necessary to protect and sustainably benefit from it.
At the heart of this documentation lie species concepts and the practical methods used to …