The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …

Angiosperms (flowering plants) are by far the most diverse land plant group with over
300,000 species. The sudden appearance of diverse angiosperms in the fossil record was …

Background Over the past decade, phylogenomics has greatly advanced our knowledge of
angiosperm evolution. However, phylogenomic studies of large angiosperm families with …

Cymbidium is an orchid genus that has undergone rapid radiation and has high ornamental,
economic, ecological and cultural importance, but its classification based on morphology is …

Maleae is one of the most widespread tribes of Rosaceae and includes several important
fruit crops and ornamental plants. We used nuclear genes from 62 transcriptomes/genomes …

Phylogenomic conflicts are widespread among genomic data, with most previous studies
primarily focusing on nuclear datasets instead of organellar genomes. In this study, we …

Polygonatum is the largest genus of tribe Polygonateae (Asparagaceae) and is widely
distributed in the temperate Northern Hemisphere, especially well diversified in …

Background Mitochondrial genomes are essential for deciphering the unique evolutionary
history of seed plants. However, the rules of their extreme variation in genomic size, multi …

Phylogenetic studies in the phylogenomics era have demonstrated that reticulate evolution
greatly impedes the accuracy of phylogenetic inference, and consequently can obscure …

Premise The history of angiosperms is marked by repeated rounds of ancient whole‐
genome duplications (WGDs). Here we used state‐of‐the‐art methods to provide an up‐to …