The microbiome and metatranscriptome of a panel from the Sarracenia mapping population reveal complex assembly and function involving host influence

J Cai, I Mohsin, W Rogers, M Zhang, L Jiang… - Frontiers in Plant …, 2024 - frontiersin.org
Sarracenia provide an optimal system for deciphering the host-microbiome interactions at
various levels. We analyzed the pitcher microbiomes and metatranscriptomes of the parental …

Integrated Metagenomics and Network Analysis of Metabolic Functional Genes in the Microbial Community of Chinese Fermentation Pits

M Guo, Y Deng, J Huang, C Zeng, H Wu, H Qin… - Fermentation, 2023 - mdpi.com
Traditional Chinese strong-aroma baijiu (CSAB) fermentation technology has been used for
thousands of years. Microbial communities that are enriched in continuous and …

The Impact of Bamboo Consumption on the Spread of Antibiotic Resistance Genes in Giant Pandas

Z Yan, X He, J Ayala, Q Xu, X Yu, R Hou, Y Yao… - Veterinary …, 2023 - mdpi.com
Simple Summary The focus of this study was to explore the impact of the transmission of
antibiotic resistance genes (ARGs) from a bamboo diet to the gut microbiota of giant pandas …

[PDF][PDF] Using BinAC to analyze microbiome samples

A Gautam, DH Huson - 8th bwHPC Symposium 28 November …, 2022 - elib.uni-stuttgart.de
In metagenomics analysis, one common approach involves aligning sequencing reads
against a protein reference database and subsequently binning those reads into taxonomic …