Persistent entropy for separating topological features from noise in vietoris-rips complexes

N Atienza, R Gonzalez-Diaz, M Rucco - Journal of Intelligent Information …, 2019 - Springer
Persistent homology studies the evolution of k-dimensional holes along a nested sequence
of simplicial complexes (called a filtration). The set of bars (ie intervals) representing birth …

Higher-order connection Laplacians for directed simplicial complexes

X Gong, DJ Higham, K Zygalakis… - Journal of Physics …, 2024 - iopscience.iop.org
Higher-order networks encode the many-body interactions existing in complex systems,
such as the brain, protein complexes, and social interactions. Simplicial complexes are …

[图书][B] Models and modeling in the sciences: A philosophical introduction

SM Downes - 2020 - taylorfrancis.com
Biologists, climate scientists, and economists all rely on models to move their work forward.
In this book, Stephen M. Downes explores the use of models in these and other fields to …

Separating topological noise from features using persistent entropy

N Atienza, R Gonzalez-Diaz, M Rucco - Federation of International …, 2016 - Springer
Topology is the branch of mathematics that studies shapes and maps among them. From the
algebraic definition of topology a new set of algorithms have been derived. These algorithms …

The case for algebraic biology: from research to education

M Macauley, N Youngs - Bulletin of Mathematical Biology, 2020 - Springer
Though it goes without saying that linear algebra is fundamental to mathematical biology,
polynomial algebra is less visible. In this article, we will give a brief tour of four diverse …

Computational topology to monitor human occupancy

P Barsocchi, P Cassará, D Giorgi, D Moroni… - Proceedings, 2018 - mdpi.com
The recent advances in sensing technologies, embedded systems, and wireless
communication technologies, make it possible to develop smart systems to monitor human …

Atlasing of assembly landscapes using distance geometry and graph rigidity

R Prabhu, M Sitharam, A Ozkan… - Journal of Chemical …, 2020 - ACS Publications
This Article describes a novel geometric methodology for analyzing free energy and kinetics
of assembly driven by short-range pair-potentials in an implicit solvent and provides a proof …

Valid Plane Trees: Combinatorial Models for RNA Secondary Structures with Watson--Crick Base Pairs

F Black, E Drellich, J Tymoczko - SIAM Journal on Discrete Mathematics, 2017 - SIAM
The combinatorics of RNA plays a central role in biology. Mathematical biologists have
several commonly used models for RNA: words in a fixed alphabet (representing the primary …

Universal Topological Quantum Computation in a Superfluid Universe

ELS Genetay Johansen - 2024 - figshare.swinburne.edu.au
Quantum computers promise to unlock immense computational power far beyond
conventional computers. Yet, their potential is hindered by instabilities, causing …

[HTML][HTML] О числе реконструкций по подсловам в бинарном алфавите при наложении на один символ

ГН Жукова, ЮГ Сметанин… - … технологии и ИТ …, 2020 - cyberleninka.ru
Рассмотрена задача получения точных оценок числа реконструкций для слов над
бинарным алфавитом. Подслова различной длины из заданного множества …