Influenza A virus cell entry, replication, virion assembly and movement

D Dou, R Revol, H Östbye, H Wang… - Frontiers in …, 2018 - frontiersin.org
Influenza viruses replicate within the nucleus of the host cell. This uncommon RNA virus trait
provides influenza with the advantage of access to the nuclear machinery during replication …

Mutation and epistasis in influenza virus evolution

DM Lyons, AS Lauring - Viruses, 2018 - mdpi.com
Influenza remains a persistent public health challenge, because the rapid evolution of
influenza viruses has led to marginal vaccine efficacy, antiviral resistance, and the annual …

SARS-CoV-2 evolution during treatment of chronic infection

SA Kemp, DA Collier, RP Datir, IATM Ferreira, S Gayed… - Nature, 2021 - nature.com
The spike protein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is
critical for virus infection through the engagement of the human ACE2 protein and is a major …

[HTML][HTML] Neutralising antibodies in Spike mediated SARS-CoV-2 adaptation

SA Kemp, DA Collier, R Datir, IATM Ferreira, S Gayed… - MedRxiv, 2020 - ncbi.nlm.nih.gov
SARS-CoV-2 Spike protein is critical for virus infection via engagement of ACE2, and amino
acid variation in Spike is increasingly appreciated. Given both vaccines and therapeutics are …

Predictive modeling of influenza shows the promise of applied evolutionary biology

DH Morris, KM Gostic, S Pompei, T Bedford… - Trends in …, 2018 - cell.com
Seasonal influenza is controlled through vaccination campaigns. Evolution of influenza virus
antigens means that vaccines must be updated to match novel strains, and vaccine …

Within-host evolution of human influenza virus

KS Xue, LH Moncla, T Bedford, JD Bloom - Trends in Microbiology, 2018 - cell.com
The rapid global evolution of influenza virus begins with mutations that arise de novo in
individual infections, but little is known about how evolution occurs within hosts. We review …

Influenza A virus reassortment in mammals gives rise to genetically distinct within-host subpopulations

K Ganti, A Bagga, S Carnaccini, LM Ferreri… - Nature …, 2022 - nature.com
Influenza A virus (IAV) genetic exchange through reassortment has the potential to
accelerate viral evolution and has played a critical role in the generation of multiple …

Population diversity and collective interactions during influenza virus infection

CB Brooke - Journal of Virology, 2017 - Am Soc Microbiol
Influenza A virus (IAV) continues to pose an enormous and unpredictable global public
health threat, largely due to the continual evolution of escape from preexisting immunity and …

Within-host viral diversity: a window into viral evolution

AS Lauring - Annual Review of Virology, 2020 - annualreviews.org
The evolutionary dynamics of a virus can differ within hosts and across populations. Studies
of within-host evolution provide an important link between experimental studies of virus …

Superinfection exclusion creates spatially distinct influenza virus populations

A Sims, LB Tornaletti, S Jasim, C Pirillo, R Devlin… - PLoS …, 2023 - journals.plos.org
Interactions between viruses during coinfections can influence viral fitness and population
diversity, as seen in the generation of reassortant pandemic influenza A virus (IAV) strains …