Visualizing high-dimensional data: Advances in the past decade

S Liu, D Maljovec, B Wang, PT Bremer… - IEEE transactions on …, 2016 - ieeexplore.ieee.org
Massive simulations and arrays of sensing devices, in combination with increasing
computing resources, have generated large, complex, high-dimensional datasets used to …

Scalar field comparison with topological descriptors: Properties and applications for scientific visualization

L Yan, TB Masood, R Sridharamurthy… - Computer Graphics …, 2021 - Wiley Online Library
In topological data analysis and visualization, topological descriptors such as persistence
diagrams, merge trees, contour trees, Reeb graphs, and Morse–Smale complexes play an …

Measuring distance between Reeb graphs

U Bauer, X Ge, Y Wang - Proceedings of the thirtieth annual symposium …, 2014 - dl.acm.org
We propose a metric for Reeb graphs, called the functional distortion distance. Under this
distance, the Reeb graph is stable against small changes of input functions. At the same …

Ccf-gnn: A unified model aggregating appearance, microenvironment, and topology for pathology image classification

H Wang, G Huang, Z Zhao, L Cheng… - … on Medical Imaging, 2023 - ieeexplore.ieee.org
Pathology images contain rich information of cell appearance, microenvironment, and
topology features for cancer analysis and diagnosis. Among such features, topology …

Progressive wasserstein barycenters of persistence diagrams

J Vidal, J Budin, J Tierny - IEEE transactions on visualization …, 2019 - ieeexplore.ieee.org
This paper presents an efficient algorithm for the progressive approximation of Wasserstein
barycenters of persistence diagrams, with applications to the visual analysis of ensemble …

Wasserstein distances, geodesics and barycenters of merge trees

M Pont, J Vidal, J Delon, J Tierny - IEEE Transactions on …, 2021 - ieeexplore.ieee.org
This paper presents a unified computational framework for the estimation of distances,
geodesics and barycenters of merge trees. We extend recent work on the edit distance 104 …

Principal geodesic analysis of merge trees (and persistence diagrams)

M Pont, J Vidal, J Tierny - IEEE Transactions on Visualization …, 2022 - ieeexplore.ieee.org
This article presents a computational framework for the Principal Geodesic Analysis of
merge trees (MT-PGA), a novel adaptation of the celebrated Principal Component Analysis …

A structural average of labeled merge trees for uncertainty visualization

L Yan, Y Wang, E Munch… - IEEE transactions on …, 2019 - ieeexplore.ieee.org
Physical phenomena in science and engineering are frequently modeled using scalar fields.
In scalar field topology, graph-based topological descriptors such as merge trees, contour …

Lifted Wasserstein matcher for fast and robust topology tracking

M Soler, M Plainchault, B Conche… - 2018 IEEE 8th …, 2018 - ieeexplore.ieee.org
This paper presents a robust and efficient method for tracking topological features in time-
varying scalar data. Structures are tracked based on the optimal matching between …

Persistence atlas for critical point variability in ensembles

G Favelier, N Faraj, B Summa… - IEEE transactions on …, 2018 - ieeexplore.ieee.org
This paper presents a new approach for the visualization and analysis of the spatial
variability of features of interest represented by critical points in ensemble data. Our …