Variant calling and benchmarking in an era of complete human genome sequences

ND Olson, J Wagner, N Dwarshuis, KH Miga… - Nature Reviews …, 2023 - nature.com
Genetic variant calling from DNA sequencing has enabled understanding of germline
variation in hundreds of thousands of humans. Sequencing technologies and variant-calling …

Current status of structural variation studies in plants

Y Yuan, PE Bayer, J Batley… - Plant Biotechnology …, 2021 - Wiley Online Library
Structural variations (SVs) including gene presence/absence variations and copy number
variations are a common feature of genomes in plants and, together with single nucleotide …

Genetic testing and counseling for the unexplained epilepsies: an evidence‐based practice guideline of the National Society of Genetic Counselors

L Smith, J Malinowski, S Ceulemans… - Journal of Genetic …, 2023 - Wiley Online Library
Epilepsy, defined by the occurrence of two or more unprovoked seizures or one unprovoked
seizure with a propensity for others, affects 0.64% of the population and can lead to …

[图书][B] Genomes 5

TA Brown - 2023 - taylorfrancis.com
Genomes 5 has been completely revised and updated. It is a thoroughly modern textbook
about genomes and how they are investigated. As with previous Genomes editions …

Plant genome resequencing and population genomics: Current status and future prospects

B Song, W Ning, D Wei, M Jiang, K Zhu, X Wang… - Molecular Plant, 2023 - cell.com
Advances in DNA sequencing technology have sparked a genomics revolution, driving
breakthroughs in plant genetics and crop breeding. Recently, the focus has shifted from …

[HTML][HTML] Omics for the improvement of abiotic, biotic, and agronomic traits in major cereal crops: Applications, challenges, and prospects

B Kaur, KS Sandhu, R Kamal, K Kaur, J Singh… - Plants, 2021 - mdpi.com
Omics technologies, namely genomics, transcriptomics, proteomics, metabolomics, and
phenomics, are becoming an integral part of virtually every commercial cereal crop breeding …

Application of high-throughput sequencing technologies and analytical tools for pathogen detection in urban water systems: Progress and future perspectives

Y Zhao, F Huang, W Wang, R Gao, L Fan… - Science of the Total …, 2023 - Elsevier
The ubiquitous presence of pathogenic microorganisms, such as viruses, bacteria, fungi,
and protozoa, in urban water systems poses a significant risk to public health. The …

“Omics” data unveil early molecular response underlying limb regeneration in the Chinese mitten crab, Eriocheir sinensis

J Wang, X Chen, X Hou, J Wang, W Yue, S Huang… - Science …, 2022 - science.org
Limb regeneration is a fascinating and medically interesting trait that has been well
preserved in arthropod lineages, particularly in crustaceans. However, the molecular …

[HTML][HTML] Emerging technologies in the study of the virome

SE Smith, W Huang, K Tiamani, M Unterer… - Current opinion in …, 2022 - Elsevier
Highlights•New amplification methods reduce biases caused by whole genome
amplification•Biases caused by assembly can be avoided using long-read …

Recent Advances in Assembly of Complex Plant Genomes

W Kong, Y Wang, S Zhang, J Yu… - Genomics, Proteomics & …, 2023 - academic.oup.com
Over the past 20 years, tremendous advances in sequencing technologies and
computational algorithms have spurred plant genomic research into a thriving era with …