Background The adoption of whole-genome sequencing in genetic screens has facilitated the detection of genetic variation in the intronic regions of genes, far from annotated splice …
CF Rowlands, D Baralle, JM Ellingford - Cells, 2019 - mdpi.com
Defects in pre-mRNA splicing are frequently a cause of Mendelian disease. Despite the advent of next-generation sequencing, allowing a deeper insight into a patient's variant …
Alternative splicing (AS) is a fundamental step in eukaryotic mRNA biogenesis. Here, we develop an efficient and reproducible pipeline for the discovery of genetic variants that affect …
Predicting the effects of genetic variants on splicing is highly relevant for human genetics. We describe the framework MMSplice (modular modeling of splicing) with which we built the …
TV Riepe, M Khan, S Roosing, FPM Cremers… - Human …, 2021 - Wiley Online Library
Hereditary disorders are frequently caused by genetic variants that affect pre‐messenger RNA splicing. Though genetic variants in the canonical splice motifs are almost always …
D Huang, Y Zhou, X Yi, X Fan, J Wang… - Nucleic acids …, 2022 - academic.oup.com
Interpreting the molecular mechanism of genomic variations and their causal relationship with diseases/traits are important and challenging problems in the human genetic study. To …
P Zhang, Q Philippot, W Ren, WT Lei… - Proceedings of the …, 2022 - National Acad Sciences
Pre-messenger RNA splicing is initiated with the recognition of a single-nucleotide intronic branchpoint (BP) within a BP motif by spliceosome elements. Forty-eight rare variants in 43 …
D Danis, JOB Jacobsen, LC Carmody… - The American Journal of …, 2021 - cell.com
A critical challenge in genetic diagnostics is the computational assessment of candidate splice variants, specifically the interpretation of nucleotide changes located outside of the …
Background At least 50% of patients with suspected Mendelian disorders remain undiagnosed after whole-exome sequencing (WES), and the extent to which non-coding …