Segment anything model (sam) for digital pathology: Assess zero-shot segmentation on whole slide imaging

R Deng, C Cui, Q Liu, T Yao, LW Remedios… - arXiv preprint arXiv …, 2023 - arxiv.org
The segment anything model (SAM) was released as a foundation model for image
segmentation. The promptable segmentation model was trained by over 1 billion masks on …

A Comprehensive Look at In Vitro Angiogenesis Image Analysis Software

M Pereira, J Pinto, B Arteaga, A Guerra… - International Journal of …, 2023 - mdpi.com
One of the complex challenges faced presently by tissue engineering (TE) is the
development of vascularized constructs that accurately mimic the extracellular matrix (ECM) …

Cosst: Multi-organ segmentation with partially labeled datasets using comprehensive supervisions and self-training

H Liu, Z Xu, R Gao, H Li, J Wang… - … on Medical Imaging, 2024 - ieeexplore.ieee.org
Deep learning models have demonstrated remarkable success in multi-organ segmentation
but typically require large-scale datasets with all organs of interest annotated. However …

Lightweight medical image segmentation network with multi-scale feature-guided fusion

Z Zhu, K Yu, G Qi, B Cong, Y Li, Z Li, X Gao - Computers in Biology and …, 2024 - Elsevier
In the field of computer-aided medical diagnosis, it is crucial to adapt medical image
segmentation to limited computing resources. There is tremendous value in developing …

Prompting Vision Foundation Models for Pathology Image Analysis

C Yin, S Liu, K Zhou, VWS Wong… - Proceedings of the …, 2024 - openaccess.thecvf.com
The rapid increase in cases of non-alcoholic fatty liver disease (NAFLD) in recent years has
raised significant public concern. Accurately identifying tissue alteration regions is crucial for …

HoloHisto: end-to-end gigapixel WSI segmentation with 4K resolution sequential tokenization

Y Tang, Y He, V Nath, P Guo, R Deng, T Yao… - arXiv preprint arXiv …, 2024 - arxiv.org
In digital pathology, the traditional method for deep learning-based image segmentation
typically involves a two-stage process: initially segmenting high-resolution whole slide …

PrPSeg: Universal Proposition Learning for Panoramic Renal Pathology Segmentation

R Deng, Q Liu, C Cui, T Yao, J Yue… - Proceedings of the …, 2024 - openaccess.thecvf.com
Understanding the anatomy of renal pathology is crucial for advancing disease diagnostics
treatment evaluation and clinical research. The complex kidney system comprises various …

Stochastic biogeography-based learning improved RIME algorithm: Application to image segmentation of lupus nephritis

B Zheng, Y Chen, C Wang, AA Heidari, L Liu, H Chen… - Cluster …, 2024 - Springer
Lupus nephritis (LN) is the most common symptom of systemic lupus erythematosus,
emphasizing its importance in the field of medicine. The growing frequency of LN has …

Semi-Supervised Instance Segmentation in Whole Slide Images via Dense Spatial Variability Enhancing

J Yu, T Ma, D Hua, F Chen, J Fu… - IEEE Journal of …, 2024 - ieeexplore.ieee.org
Current whole slide image (WSI) segmentation aims at extracting tumor regions from the
background. Unlike this, segmenting distinct tumor areas (instances) within a WSI driven by …

MedUniSeg: 2D and 3D Medical Image Segmentation via a Prompt-driven Universal Model

Y Ye, Z Chen, J Zhang, Y Xie, Y Xia - arXiv preprint arXiv:2410.05905, 2024 - arxiv.org
Universal segmentation models offer significant potential in addressing a wide range of
tasks by effectively leveraging discrete annotations. As the scope of tasks and modalities …