When are pathogen genome sequences informative of transmission events?

F Campbell, C Strang, N Ferguson, A Cori… - PLoS …, 2018 - journals.plos.org
Recent years have seen the development of numerous methodologies for reconstructing
transmission trees in infectious disease outbreaks from densely sampled whole genome …

Wastewater surveillance beyond COVID-19: a ranking system for communicable disease testing in the tri-county Detroit area, Michigan, USA

Z Gentry, L Zhao, RA Faust, RE David… - Frontiers in Public …, 2023 - frontiersin.org
Introduction Throughout the coronavirus disease 2019 (COVID-19) pandemic, wastewater
surveillance has been utilized to monitor the disease in the United States through routine …

Estimating the transmissibility of hand, foot, and mouth disease by a dynamic model

S Chen, D Yang, R Liu, J Zhao, K Yang, T Chen - Public health, 2019 - Elsevier
Objective Hand, foot, and mouth disease (HFMD) is a serious public health issue in many
countries; however, its transmissibility in county-level outbreaks remains unclear. The aim of …

Enteric pathogens and factors associated with acute bloody diarrhoea, Kenya

C Njuguna, I Njeru, E Mgamb, D Langat… - BMC infectious …, 2016 - Springer
Background Shigellosis is the major cause of bloody diarrhoea worldwide and is endemic in
most developing countries. In Kenya, bloody diarrhoea is reported weekly as part of priority …

Heavy precipitation as a risk factor for shigellosis among homeless persons during an outbreak—Oregon, 2015–2016

JZ Hines, MA Jagger, TL Jeanne, N West, A Winquist… - Journal of Infection, 2018 - Elsevier
Objectives Shigella species are the third most common cause of bacterial gastroenteritis in
the United States. During a Shigella sonnei outbreak in Oregon from July 2015 through June …

Inferring the spread of COVID-19: the role of time-varying reporting rate in epidemiological modelling

A Spannaus, T Papamarkou, S Erwin, JB Christian - Scientific reports, 2022 - nature.com
The role of epidemiological models is crucial for informing public health officials during a
public health emergency, such as the COVID-19 pandemic. However, traditional …

Daily temperature change in relation to the risk of childhood bacillary dysentery among different age groups and sexes in a temperate city in China

K Li, K Zhao, L Shi, L Wen, H Yang, J Cheng, X Wang… - Public Health, 2016 - Elsevier
Background In recent years, many studies have found that ambient temperature is
significantly associated with bacillary dysentery (BD). However, there is limited evidence on …

Rapid mortality transition of Pacific Islands in the 19th century

BS Penman, S Gupta, GD Shanks - Epidemiology & Infection, 2017 - cambridge.org
The depopulation of Pacific islands during the 16th to 19th centuries is a striking example of
historical mass mortality due to infectious disease. Pacific Island populations have not been …

Relative transmissibility of shigellosis among male and female individuals: a modeling study in Hubei Province, China

ZY Zhao, Q Chen, B Zhao, MN Hannah, N Wang… - Infectious Diseases of …, 2020 - Springer
Background Developing countries exhibit a high disease burden from shigellosis. Owing to
the different incidences in males and females, this study aims to analyze the features …

The size of the susceptible pool differentiates climate effects on seasonal epidemics of bacillary dysentery

H Ni, Q Zeng, T Xu, L Xiao, X Yu, J Hu, Y Li… - Science of The Total …, 2023 - Elsevier
Objectives At present, some studies have pointed out several possible climate drivers of
bacillary dysentery. However, there is a complex nonlinear interaction between climate …