Interpreting solution X-ray scattering data using molecular simulations
JS Hub - Current opinion in structural biology, 2018 - Elsevier
Small-angle and wide-angle X-ray scattering in solution (SAXS, WAXS, SWAXS) is an
increasingly accurate method for obtaining information on biomolecular structures …
increasingly accurate method for obtaining information on biomolecular structures …
X-ray scattering studies of protein structural dynamics
X-ray scattering is uniquely suited to the study of disordered systems and thus has the
potential to provide insight into dynamic processes where diffraction methods fail. In …
potential to provide insight into dynamic processes where diffraction methods fail. In …
Accurate SAXS profile computation and its assessment by contrast variation experiments
A major challenge in structural biology is to characterize structures of proteins and their
assemblies in solution. At low resolution, such a characterization may be achieved by small …
assemblies in solution. At low resolution, such a characterization may be achieved by small …
ModBase, a database of annotated comparative protein structure models and associated resources
U Pieper, BM Webb, GQ Dong… - Nucleic acids …, 2014 - academic.oup.com
Abstract ModBase (http://salilab. org/modbase) is a database of annotated comparative
protein structure models. The models are calculated by ModPipe, an automated modeling …
protein structure models. The models are calculated by ModPipe, an automated modeling …
SAXS studies of RNA: structures, dynamics, and interactions with partners
Small‐angle X‐ray scattering, SAXS, is a powerful and easily employed experimental
technique that provides solution structures of macromolecules. The size and shape …
technique that provides solution structures of macromolecules. The size and shape …
Multidomain architecture of estrogen receptor reveals interfacial cross-talk between its DNA-binding and ligand-binding domains
Human estrogen receptor alpha (hERα) is a hormone-responsive nuclear receptor (NR)
involved in cell growth and survival that contains both a DNA-binding domain (DBD) and a …
involved in cell growth and survival that contains both a DNA-binding domain (DBD) and a …
Protein footprinting: Auxiliary engine to power the structural biology revolution
Structural biology is entering an exciting time where many new high-resolution structures of
large complexes and membrane proteins are determined regularly. These advances have …
large complexes and membrane proteins are determined regularly. These advances have …
Advances, Applications, and Perspectives in Small‐Angle X‐ray Scattering of RNA
JN Tants, A Schlundt - Chembiochem, 2023 - Wiley Online Library
RNAs exhibit a plethora of functions far beyond transmitting genetic information. Often, RNA
functions are entailed in their structure, be it as a regulatory switch, protein binding site, or …
functions are entailed in their structure, be it as a regulatory switch, protein binding site, or …
A metastable contact and structural disorder in the estrogen receptor transactivation domain
The N-terminal transactivation domain (NTD) of estrogen receptor alpha, a well-known
member of the family of intrinsically disordered proteins, mediates the receptor's …
member of the family of intrinsically disordered proteins, mediates the receptor's …
SAXS data alone can generate high-quality models of protein-protein complexes
Modeling driven by small-angle X-ray scattering (SAXS) combines low-resolution data with
computational modeling to predict the structure of biomolecular assemblies. A new protocol …
computational modeling to predict the structure of biomolecular assemblies. A new protocol …