Click chemistry in proteomic investigations

CG Parker, MR Pratt - Cell, 2020 - cell.com
Despite advances in genetic and proteomic techniques, a complete portrait of the proteome
and its complement of dynamic interactions and modifications remains a lofty, and as of yet …

Metabolic hallmarks of hepatic stellate cells in liver fibrosis

O Khomich, AV Ivanov, B Bartosch - Cells, 2019 - mdpi.com
Liver fibrosis is a regenerative process that occurs after injury. It is characterized by the
deposition of connective tissue by specialized fibroblasts and concomitant proliferative …

Cysteine oxidation in proteins: structure, biophysics, and simulation

D Garrido Ruiz, A Sandoval-Perez, AV Rangarajan… - Biochemistry, 2022 - ACS Publications
Cysteine side chains can exist in distinct oxidation states depending on the pH and redox
potential of the environment, and cysteine oxidation plays important yet complex regulatory …

Activity-based sensing for site-specific proteomic analysis of cysteine oxidation

Y Shi, KS Carroll - Accounts of chemical research, 2019 - ACS Publications
Conspectus Oxidative post-translational modifications (OxiPTMs) of cysteine residues are
the molecular foundation of thiol-based redox regulation that modulates physiological …

Chemical tools for endogenous protein labeling and profiling

K Shiraiwa, R Cheng, H Nonaka, T Tamura… - Cell Chemical …, 2020 - cell.com
Protein analysis under biological conditions is now regarded as indispensable for
understanding the structure and function of proteins, in addition to in vitro studies using …

Oxidation-induced “one-pot” click chemistry

B Albada, JF Keijzer, H Zuilhof, F van Delft - Chemical Reviews, 2021 - ACS Publications
Click chemistry has been established rapidly as one of the most valuable methods for the
chemical transformation of complex molecules. Due to the rapid rates, clean conversions to …

Imaging and profiling of proteins under oxidative conditions in cells and tissues by hydrogen-peroxide-responsive labeling

H Zhu, T Tamura, A Fujisawa, Y Nishikawa… - Journal of the …, 2020 - ACS Publications
Reactive oxygen species (ROS) such as hydrogen peroxide (H2O2) can inflict damage to
biomolecules under oxidative stress and also act as signaling molecules at physiological …

Identifying redox-sensitive cysteine residues in mitochondria

EA Kisty, EC Saart, E Weerapana - Antioxidants, 2023 - mdpi.com
The mitochondrion is the primary energy generator of a cell and is a central player in cellular
redox regulation. Mitochondrial reactive oxygen species (mtROS) are the natural byproducts …

Sulfoxides and disulfides from sulfenic acids: Synthesis and applications

CMA Gangemi, E D'Agostino, MC Aversa, A Barattucci… - Tetrahedron, 2023 - Elsevier
Sulfur-based functional groups are found in a broad range of natural products and
therapeutic compounds. The sulfoxide moiety is present in a significant portion of …

Selective Modification of Ribosomally Synthesized and Post‐Translationally Modified Peptides (RiPPs) through Diels–Alder Cycloadditions on Dehydroalanine …

RH de Vries, JH Viel, R Oudshoorn… - … A European Journal, 2019 - Wiley Online Library
We report the late‐stage chemical modification of ribosomally synthesized and post‐
translationally modified peptides (RIPPs) by Diels–Alder cycloadditions to naturally …