[HTML][HTML] Assessment of immune status using blood transcriptomics and potential implications for global health

D Chaussabel - Seminars in immunology, 2015 - Elsevier
The immune system plays a key role in health maintenance and pathogenesis of a wide
range of diseases. Leukocytes that are present in the blood convey valuable information …

A review on computational systems biology of pathogen–host interactions

S Durmuş, T Çakır, A Özgür, R Guthke - Frontiers in microbiology, 2015 - frontiersin.org
Pathogens manipulate the cellular mechanisms of host organisms via pathogen–host
interactions (PHIs) in order to take advantage of the capabilities of host cells, leading to …

Network representations of immune system complexity

N Subramanian, P Torabi‐Parizi… - … Systems Biology and …, 2015 - Wiley Online Library
The mammalian immune system is a dynamic multiscale system composed of a
hierarchically organized set of molecular, cellular, and organismal networks that act in …

Cell polarization and epigenetic status shape the heterogeneous response to type III interferons in intestinal epithelial cells

S Bhushal, M Wolfsmüller, TA Selvakumar… - Frontiers in …, 2017 - frontiersin.org
Type I and type III interferons (IFNs) are crucial components of the first-line antiviral host
response. While specific receptors for both IFN types exist, intracellular signaling shares the …

A perspective on the role of computational models in immunology

AK Chakraborty - Annual review of immunology, 2017 - annualreviews.org
This is an exciting time for immunology because the future promises to be replete with
exciting new discoveries that can be translated to improve health and treat disease in novel …

Coupling of T cell receptor specificity to natural killer T cell development by bivalent histone H3 methylation

MW Dobenecker, JK Kim, J Marcello, TC Fang… - Journal of Experimental …, 2015 - rupress.org
The fidelity of T cell immunity depends greatly on coupling T cell receptor signaling with
specific T cell effector functions. Here, we describe a chromatin-based mechanism that …

Systems-level analysis of innate immunity

DE Zak, VC Tam, A Aderem - Annual review of immunology, 2014 - annualreviews.org
Systems-level analysis of biological processes strives to comprehensively and quantitatively
evaluate the interactions between the relevant molecular components over time, thereby …

Vaccinology in the third millennium: scientific and social challenges

GA Poland, JA Whitaker, CM Poland… - Current opinion in …, 2016 - Elsevier
Highlights•Vaccines have eradicated smallpox, nearly eradicated polio, and resulted in
99.9% reduction in incidence rates for many diseases.•There are significant challenges …

A synchronous IRF4-dependent gene regulatory network in B and helper T cells orchestrating the antibody response

SL Cook, MC Franke, EP Sievert, R Sciammas - Trends in immunology, 2020 - cell.com
Control of diverse pathogens requires an adaptive antibody response, dependent on
cellular division of labor to allocate antigen-dependent B-and CD4+ T-cell fates that …

The role of omics approaches to characterize molecular mechanisms of rare ovarian cancers: recent advances and future perspectives

Y Subbannayya, R Di Fiore, SAM Urru, J Calleja-Agius - Biomedicines, 2021 - mdpi.com
Rare ovarian cancers are ovarian cancers with an annual incidence of less than 6 cases per
100,000 women. They generally have a poor prognosis due to being delayed diagnosis and …