Satellite DNA: an evolving topic

MA Garrido-Ramos - Genes, 2017 - mdpi.com
Satellite DNA represents one of the most fascinating parts of the repetitive fraction of the
eukaryotic genome. Since the discovery of highly repetitive tandem DNA in the 1960s, a lot …

[HTML][HTML] What makes a centromere?

PB Talbert, S Henikoff - Experimental cell research, 2020 - Elsevier
Centromeres are the eukaryotic chromosomal sites at which the kinetochore forms and
attaches to spindle microtubules to orchestrate chromosomal segregation in mitosis and …

Repeat-based holocentromeres influence genome architecture and karyotype evolution

PG Hofstatter, G Thangavel, T Lux, P Neumann… - Cell, 2022 - cell.com
The centromere represents a single region in most eukaryotic chromosomes. However,
several plant and animal lineages assemble holocentromeres along the entire chromosome …

TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads

P Novák, L Ávila Robledillo, A Koblížková… - Nucleic acids …, 2017 - academic.oup.com
Satellite DNA is one of the major classes of repetitive DNA, characterized by tandemly
arranged repeat copies that form contiguous arrays up to megabases in length. This type of …

Fluorescence in situ hybridization in plants: recent developments and future applications

J Jiang - Chromosome Research, 2019 - Springer
Fluorescence in situ hybridization (FISH) was developed more than 30 years ago and has
been the most paradigm-changing technique in cytogenetic research. FISH has been used …

High-quality genome sequence of white lupin provides insight into soil exploration and seed quality

B Hufnagel, A Marques, A Soriano, L Marquès… - Nature …, 2020 - nature.com
White lupin (Lupinus albus L.) is an annual crop cultivated for its protein-rich seeds. It is
adapted to poor soils due to the production of cluster roots, which are made of dozens of …

Centromeres: From chromosome biology to biotechnology applications and synthetic genomes in plants

J Zhou, Y Liu, X Guo, JA Birchler… - Plant Biotechnology …, 2022 - Wiley Online Library
Centromeres are the genomic regions that organize and regulate chromosome behaviours
during cell cycle, and their variations are associated with genome instability, karyotype …

Genomic hotspots of chromosome rearrangements explain conserved synteny despite high rates of chromosome evolution in a holocentric lineage

M Escudero, A Marques, K Lucek, AL Hipp - Molecular Ecology, 2024 - Wiley Online Library
Holocentric organisms, unlike typical monocentric organisms, have kinetochore activity
distributed along almost the whole length of the chromosome. Because of this, chromosome …

Holocentromeres can consist of merely a few megabase-sized satellite arrays

YT Kuo, AS Câmara, V Schubert, P Neumann… - Nature …, 2023 - nature.com
The centromere is the chromosome region where microtubules attach during cell division. In
contrast to monocentric chromosomes with one centromere, holocentric species usually …

Retrotransposons: How the continuous evolutionary front shapes plant genomes for response to heat stress

PK Papolu, M Ramakrishnan, S Mullasseri… - Frontiers in plant …, 2022 - frontiersin.org
Long terminal repeat retrotransposons (LTR retrotransposons) are the most abundant group
of mobile genetic elements in eukaryotic genomes and are essential in organizing genomic …