Neuron tracing from light microscopy images: automation, deep learning and bench testing
Motivation Large-scale neuronal morphologies are essential to neuronal typing, connectivity
characterization and brain modeling. It is widely accepted that automation is critical to the …
characterization and brain modeling. It is widely accepted that automation is critical to the …
Deep learning in mesoscale brain microscopy image analysis: A review
R Chen, M Liu, W Chen, Y Wang, E Meijering - Computers in Biology and …, 2023 - Elsevier
Mesoscale microscopy images of the brain contain a wealth of information which can help
us understand the working mechanisms of the brain. However, it is a challenging task to …
us understand the working mechanisms of the brain. However, it is a challenging task to …
PointNeuron: 3D Neuron Reconstruction via Geometry and Topology Learning of Point Clouds
Digital neuron reconstruction from 3D microscopy images is an essential technique for
investigating brain connectomics and neuron morphology. Existing reconstruction …
investigating brain connectomics and neuron morphology. Existing reconstruction …
[HTML][HTML] Hidden Markov modeling for maximum probability neuron reconstruction
Recent advances in brain clearing and imaging have made it possible to image entire
mammalian brains at sub-micron resolution. These images offer the potential to assemble …
mammalian brains at sub-micron resolution. These images offer the potential to assemble …
Neuronal Image Reconstruction
Y Liu, K Chen, H Peng - Frontiers in Bioimage Informatics …, 2024 - World Scientific
Neurons are the fundamental units responsible for the structure and function of the brain,
making their morphologies crucial for characterizing the brain. In this chapter, we provide an …
making their morphologies crucial for characterizing the brain. In this chapter, we provide an …
Extracting Mesoscale Neuron Anatomy from Whole-Brain Images
T Athey - 2023 - jscholarship.library.jhu.edu
Recent advances in brain tissue preparation and imaging have made it possible to image
entire mammalian brains at sub-micron resolution. This has made it possible to capture the …
entire mammalian brains at sub-micron resolution. This has made it possible to capture the …
Hidden markov modeling for maximum likelihood neuron reconstruction
Recent advances in brain clearing and imaging have made it possible to image entire
mammalian brains at sub-micron resolution. These images offer the potential to assemble …
mammalian brains at sub-micron resolution. These images offer the potential to assemble …