Retention of duplicated genes in evolution

E Kuzmin, JS Taylor, C Boone - Trends in Genetics, 2022 - cell.com
Gene duplication is a prevalent phenomenon across the tree of life. The processes that lead
to the retention of duplicated genes are not well understood. Functional genomics …

Polyploidy as a fundamental phenomenon in evolution, development, adaptation and diseases

OV Anatskaya, AE Vinogradov - International Journal of Molecular …, 2022 - mdpi.com
DNA replication during cell proliferation is 'vertical'copying, which reproduces an initial
amount of genetic information. Polyploidy, which results from whole-genome duplication, is …

Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass

JT Lovell, AH MacQueen, S Mamidi, J Bonnette… - Nature, 2021 - nature.com
Long-term climate change and periodic environmental extremes threaten food and fuel
security and global crop productivity,–. Although molecular and adaptive breeding strategies …

Evolutionary biology through the lens of budding yeast comparative genomics

S Marsit, JB Leducq, É Durand, A Marchant… - Nature Reviews …, 2017 - nature.com
The budding yeast Saccharomyces cerevisiae is a highly advanced model system for
studying genetics, cell biology and systems biology. Over the past decade, the application of …

Living organisms author their read-write genomes in evolution

JA Shapiro - Biology, 2017 - mdpi.com
Evolutionary variations generating phenotypic adaptations and novel taxa resulted from
complex cellular activities altering genome content and expression:(i) Symbiogenetic cell …

Where whole‐genome duplication is most beneficial: adaptation of mangroves to a wide salinity range between land and sea

S Xu, Z Guo, X Feng, S Shao, Y Yang, J Li… - Molecular …, 2023 - Wiley Online Library
Whole‐genome duplication (WGD) is believed to increase the chance of adaptation to a new
environment. This conjecture may apply particularly well to new environments that are not …

Variation of gene expression in plants is influenced by gene architecture and structural properties of promoters

S Das, M Bansal - PLoS One, 2019 - journals.plos.org
In higher eukaryotes, gene architecture and structural properties of promoters have emerged
as significant factors influencing variation in number of transcripts (expression level) and …

The role of structural variation in adaptation and evolution of yeast and other fungi

A Gorkovskiy, KJ Verstrepen - Genes, 2021 - mdpi.com
Mutations in DNA can be limited to one or a few nucleotides, or encompass larger deletions,
insertions, duplications, inversions and translocations that span long stretches of DNA or …

Genetic redundancy of senescence-associated transcription factors in Arabidopsis

Z Li, HR Woo, H Guo - Journal of Experimental Botany, 2018 - academic.oup.com
Leaf senescence is a genetically programmed process that constitutes the last stage of leaf
development, and involves massive changes in gene expression. As a result of the intensive …

Population genomics of colonization and invasion

SR Welles, KM Dlugosch - Population genomics: Concepts, approaches …, 2019 - Springer
Population genomic analyses can reveal the mechanisms shaping the evolution of
colonizing and invasive taxa, as for any species, including the fundamental processes of …