[HTML][HTML] The Hippo transducer TAZ confers cancer stem cell-related traits on breast cancer cells

M Cordenonsi, F Zanconato, L Azzolin, M Forcato… - Cell, 2011 - cell.com
Cancer stem cells (CSCs) are proposed to drive tumor initiation and progression. Yet, our
understanding of the cellular and molecular mechanisms that underlie CSC properties is …

[HTML][HTML] A MicroRNA targeting dicer for metastasis control

G Martello, A Rosato, F Ferrari, A Manfrin… - Cell, 2010 - cell.com
Although specific microRNAs (miRNAs) can be upregulated in cancer, global miRNA
downregulation is a common trait of human malignancies. The mechanisms of this …

Integrating genetics and epigenetics in breast cancer: biological insights, experimental, computational methods and therapeutic potential

C Cava, G Bertoli, I Castiglioni - BMC systems biology, 2015 - Springer
Background Development of human cancer can proceed through the accumulation of
different genetic changes affecting the structure and function of the genome. Combined …

Identification of osteosarcoma driver genes by integrative analysis of copy number and gene expression data

ML Kuijjer, H Rydbeck, SH Kresse… - Genes …, 2012 - Wiley Online Library
High‐grade osteosarcoma is a tumor with a complex genomic profile, occurring primarily in
adolescents with a second peak at middle age. The extensive genomic alterations obscure …

Prospective biomarker analysis of the randomized CHER-LOB study evaluating the dual anti-HER2 treatment with trastuzumab and lapatinib plus chemotherapy as …

V Guarneri, MV Dieci, A Frassoldati, A Maiorana… - The …, 2015 - academic.oup.com
Abstract Background. The CHER-LOB randomized phase II study showed that the
combination of lapatinib and trastuzumab plus chemotherapy increases the pathologic …

Efficient weighted univariate clustering maps outstanding dysregulated genomic zones in human cancers

M Song, H Zhong - Bioinformatics, 2020 - academic.oup.com
Motivation Chromosomal patterning of gene expression in cancer can arise from
aneuploidy, genome disorganization or abnormal DNA methylation. To map such patterns …

Patient-specific data fusion defines prognostic cancer subtypes

Y Yuan, RS Savage, F Markowetz - PLoS computational biology, 2011 - journals.plos.org
Different data types can offer complementary perspectives on the same biological
phenomenon. In cancer studies, for example, data on copy number alterations indicate …

Cancer gene prioritization by integrative analysis of mRNA expression and DNA copy number data: a comparative review

L Lahti, M Schäfer, HU Klein, S Bicciato… - Briefings in …, 2013 - academic.oup.com
A variety of genome-wide profiling techniques are available to investigate complementary
aspects of genome structure and function. Integrative analysis of heterogeneous data …

Double-blind, placebo-controlled, multicenter, randomized, Phase IIB neoadjuvant study of letrozole-lapatinib in postmenopausal hormone receptor–positive, human …

V Guarneri, DG Generali, A Frassoldati… - Journal of Clinical …, 2014 - ascopubs.org
Purpose This is a randomized, double-blind, placebo-controlled study aimed to evaluate the
clinical and biologic effects of letrozole plus lapatinib or placebo as neoadjuvant therapy in …

Lessons from a decade of integrating cancer copy number alterations with gene expression profiles

N Huang, PK Shah, C Li - Briefings in bioinformatics, 2012 - academic.oup.com
Over the last decade, multiple functional genomic datasets studying chromosomal
aberrations and their downstream effects on gene expression have accumulated for several …