Molecular microbial ecology: land of the one-eyed king

LJ Forney, X Zhou, CJ Brown - Current opinion in microbiology, 2004 - Elsevier
Studies of microbial biodiversity have made astounding discoveries of late due to the use of
methodologies based on phylogenetic analyses of small subunit ribosomal RNA sequences …

Evaluation of molecular methods used for establishing the interactions and functions of microorganisms in anaerobic bioreactors

G Talbot, E Topp, MF Palin, DI Massé - Water research, 2008 - Elsevier
Molecular techniques have unveiled the complexity of the microbial consortium in anaerobic
bioreactors and revealed the presence of several uncultivated species. This paper presents …

Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques

H Tamaki, Y Sekiguchi, S Hanada… - Applied and …, 2005 - Am Soc Microbiol
Comparative analysis of bacterial diversity in freshwater sediment collected from a shallow
eutrophic lake was performed by using 16S rRNA gene clone library and improved …

Evaluation of multifarious plant growth promoting traits, antagonistic potential and phylogenetic affiliation of rhizobacteria associated with commercial tea plants grown …

J Dutta, D Thakur - PloS one, 2017 - journals.plos.org
Plant growth promoting rhizobacteria (PGPR) are studied in different agricultural crops but
the interaction of PGPR of tea crop is not yet studied well. In the present study, the …

The desert of Tataouine: an extreme environment that hosts a wide diversity of microorganisms and radiotolerant bacteria

A Chanal, V Chapon, K Benzerara… - Environmental …, 2006 - Wiley Online Library
The phylogenetic diversity of prokaryotic communities exposed to arid conditions in the hot
desert of Tataouine (south Tunisia) was estimated with a combination of a culture and …

Culture-dependent and culture-independent diversity surveys target different bacteria: a case study in a freshwater sample

I Vaz-Moreira, C Egas, OC Nunes… - Antonie Van Leeuwenhoek, 2011 - Springer
Compared with culture-independent approaches, traditionally used culture-dependent
methods have a limited capacity to characterize water microbiota. Nevertheless, for almost a …

High local and global diversity of Flavobacteria in marine plankton

C Alonso, F Warnecke, R Amann… - Environmental …, 2007 - Wiley Online Library
Members of the phylum Bacteroidetes are among the most abundant microbes in coastal
marine waters, but it is unclear to which extent the diversity within this phylum is covered by …

Bacterial diversity from the source to the tap: a comparative study based on 16S rRNA gene-DGGE and culture-dependent methods

VM Ivone, E Conceição, N Olga C… - FEMS microbiology …, 2013 - academic.oup.com
This study aimed to assess the influence of water treatment and distribution on the bacterial
communities with particular emphasis on tap water. Samples from the water treatment plant …

The effect of increased loads of dissolved organic matter on estuarine microbial community composition and function

SJ Traving, O Rowe, NM Jakobsen… - Frontiers in …, 2017 - frontiersin.org
Increased river loads are projected as one of the major consequences of climate change in
the northern hemisphere, leading to elevated inputs of riverine dissolved organic matter …

Seasonal changes in bacterioplankton nutrient limitation and their effects on bacterial community composition in the NW Mediterranean Sea

J Pinhassi, L Gómez-Consarnau… - Aquatic Microbial …, 2006 - int-res.com
Bacterioplankton growth is expected to depend on the availability of organic and inorganic
nutrients. Still, no studies have investigated how the magnitude and type of nutrient limitation …