From big data analysis to personalized medicine for all: challenges and opportunities
Recent advances in high-throughput technologies have led to the emergence of systems
biology as a holistic science to achieve more precise modeling of complex diseases. Many …
biology as a holistic science to achieve more precise modeling of complex diseases. Many …
The past, present and future of the ELKH cloud
This review article summarizes the history the Hungarian Scientific Cloud Infrastructure
project. This research infrastructure was launched officially on 1 October 2016, funded by …
project. This research infrastructure was launched officially on 1 October 2016, funded by …
Best practices for scientific computing
Best Practices for Scientific Computing | PLOS Biology Skip to main content Advertisement
PLOS Biology Browse Current Issue Journal Archive Collections Find and Read Articles Publish …
PLOS Biology Browse Current Issue Journal Archive Collections Find and Read Articles Publish …
Evaluating a large language model's ability to solve programming exercises from an introductory bioinformatics course
Computer programming is a fundamental tool for life scientists, allowing them to carry out
essential research tasks. However, despite various educational efforts, learning to write …
essential research tasks. However, despite various educational efforts, learning to write …
Many bioinformatics programming tasks can be automated with ChatGPT
Computer programming is a fundamental tool for life scientists, allowing them to carry out
many essential research tasks. However, despite a variety of educational efforts, learning to …
many essential research tasks. However, despite a variety of educational efforts, learning to …
Software Carpentry: lessons learned
G Wilson - F1000Research, 2016 - pmc.ncbi.nlm.nih.gov
Since its start in 1998, Software Carpentry has evolved from a week-long training course at
the US national laboratories into a worldwide volunteer effort to improve researchers' …
the US national laboratories into a worldwide volunteer effort to improve researchers' …
Trials and tribulations of developers of intelligent systems: A field study
Intelligent systems are gaining in popularity and receiving increased media attention, but
little is known about how people actually go about developing them. In this paper, we …
little is known about how people actually go about developing them. In this paper, we …
A large-scale study of MPI usage in open-source HPC applications
Understanding the state-of-the-practice in MPI usage is paramount for many aspects of
supercomputing, including optimizing the communication of HPC applications and informing …
supercomputing, including optimizing the communication of HPC applications and informing …
Software engineering for computational science: Past, present, future
A Johanson, W Hasselbring - Computing in Science & …, 2018 - ieeexplore.ieee.org
Despite the increasing importance of in silico experiments to the scientific discovery process,
state-of-the-art software engineering practices are rarely adopted in computational science …
state-of-the-art software engineering practices are rarely adopted in computational science …
[HTML][HTML] Landlab v2. 0: A software package for Earth surface dynamics
Numerical simulation of the form and characteristics of Earth's surface provides insight into
its evolution. Landlab is an open-source Python package that contains modularized …
its evolution. Landlab is an open-source Python package that contains modularized …