Cell-signalling dynamics in time and space

BN Kholodenko - Nature reviews Molecular cell biology, 2006 - nature.com
The specificity of cellular responses to receptor stimulation is encoded by the spatial and
temporal dynamics of downstream signalling networks. Temporal dynamics are coupled to …

Bacterial quorum sensing: signals, circuits, and implications for biofilms and disease

A Jayaraman, TK Wood - Annu. Rev. Biomed. Eng., 2008 - annualreviews.org
Communication between bacteria, belonging to the same species or to different species, is
mediated through different chemical signals that are synthesized and secreted by bacteria …

A comprehensive pathway map of epidermal growth factor receptor signaling

K Oda, Y Matsuoka, A Funahashi… - Molecular systems …, 2005 - embopress.org
The epidermal growth factor receptor (EGFR) signaling pathway is one of the most important
pathways that regulate growth, survival, proliferation, and differentiation in mammalian cells …

Spatiotemporal control of gene expression with pulse-generating networks

S Basu, R Mehreja, S Thiberge… - Proceedings of the …, 2004 - National Acad Sciences
One of the important challenges in the emerging field of synthetic biology is designing
artificial networks that achieve coordinated behavior in cell communities. Here we present a …

The EGF receptor family: spearheading a merger of signaling and therapeutics

EM Bublil, Y Yarden - Current opinion in cell biology, 2007 - Elsevier
The ErbB receptor tyrosine kinases evolved as key regulatory entities enabling the
extracellular milieu to communicate with the intracellular machinery to bring forth the …

Positive feedback in cellular control systems

AY Mitrophanov, EA Groisman - Bioessays, 2008 - Wiley Online Library
Feedback loops have been identified in a variety of regulatory systems and organisms.
While feedback loops of the same type (negative or positive) tend to have properties in …

Microfluidics-based systems biology

DN Breslauer, PJ Lee, LP Lee - Molecular Biosystems, 2006 - pubs.rsc.org
Systems biology seeks to develop a complete understanding of cellular mechanisms by
studying the functions of intra-and inter-cellular molecular interactions that trigger and …

[HTML][HTML] Morpheus unbound: reimagining the morphogen gradient

AD Lander - Cell, 2007 - cell.com
The theory that the spatial organization of cell fate is orchestrated by gradients of diffusing
molecules was a major contribution to 20 th century developmental biology. Although the …

Computational modeling of the EGF-receptor system: a paradigm for systems biology

HS Wiley, SY Shvartsman, DA Lauffenburger - Trends in cell biology, 2003 - cell.com
Computational models have rarely been used as tools by biologists but, when models
provide experimentally testable predictions, they can be extremely useful. The epidermal …

Mathematical modeling of planar cell polarity to understand domineering nonautonomy

K Amonlirdviman, NA Khare, DRP Tree, WS Chen… - Science, 2005 - science.org
Planar cell polarity (PCP) signaling generates subcellular asymmetry along an axis
orthogonal to the epithelial apical-basal axis. Through a poorly understood mechanism, cell …