Phylogenomics and the flowering plant tree of life

C Guo, Y Luo, LM Gao, TS Yi, HT Li… - Journal of Integrative …, 2023 - Wiley Online Library
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …

OCBIL theory examined: reassessing evolution, ecology and conservation in the world's ancient, climatically buffered and infertile landscapes

SD Hopper, H Lambers, FAO Silveira… - Biological Journal of …, 2021 - academic.oup.com
OCBIL theory was introduced as a contribution towards understanding the evolution,
ecology and conservation of the biological and cultural diversity of old, climatically buffered …

Plastid phylogenomic insights into relationships of all flowering plant families

HT Li, Y Luo, L Gan, PF Ma, LM Gao, JB Yang, J Cai… - BMC biology, 2021 - Springer
Background Flowering plants (angiosperms) are dominant components of global terrestrial
ecosystems, but phylogenetic relationships at the familial level and above remain only …

Global analysis of Poales diversification–parallel evolution in space and time into open and closed habitats

TL Elliott, D Spalink, I Larridon, AR Zuntini… - New …, 2024 - Wiley Online Library
Poales are one of the most species‐rich, ecologically and economically important orders of
plants and often characterise open habitats, enabled by unique suites of traits. We test six …

A plastid phylogenomic framework for the palm family (Arecaceae)

G Yao, YQ Zhang, C Barrett, B Xue, S Bellot, WJ Baker… - BMC biology, 2023 - Springer
Background Over the past decade, phylogenomics has greatly advanced our knowledge of
angiosperm evolution. However, phylogenomic studies of large angiosperm families with …

Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy

MH Li, KW Liu, Z Li, HC Lu, QL Ye, D Zhang, JY Wang… - Nature Plants, 2022 - nature.com
To improve our understanding of the origin and evolution of mycoheterotrophic plants, we
here present the chromosome-scale genome assemblies of two sibling orchid species …

The slow-evolving Acorus tatarinowii genome sheds light on ancestral monocot evolution

T Shi, C Huneau, Y Zhang, Y Li, J Chen, J Salse… - Nature Plants, 2022 - nature.com
Monocots are one of the most diverse groups of flowering plants, and tracing the evolution of
their ancestral genome into modern species is essential for understanding their evolutionary …

Musa balbisiana genome reveals subgenome evolution and functional divergence

Z Wang, H Miao, J Liu, B Xu, X Yao, C Xu, S Zhao… - Nature plants, 2019 - nature.com
Banana cultivars (Musa ssp.) are diploid, triploid and tetraploid hybrids derived from Musa
acuminata and Musa balbisiana. We presented a high-quality draft genome assembly of M …

Convergent loss of an EDS1/PAD4 signaling pathway in several plant lineages reveals coevolved components of plant immunity and drought response

EL Baggs, JG Monroe, AS Thanki, R O'Grady… - The Plant …, 2020 - academic.oup.com
Plant innate immunity relies on nucleotide binding leucine-rich repeat receptors (NLRs) that
recognize pathogen-derived molecules and activate downstream signaling pathways. We …

[PDF][PDF] Phylogenomic analyses of Alismatales shed light into adaptations to aquatic environments

LY Chen, B Lu, DF Morales-Briones… - Molecular Biology …, 2022 - academic.oup.com
Land plants first evolved from freshwater algae, and flowering plants returned to water as
early as the Cretaceous and multiple times subsequently. Alismatales is the largest clade of …