Epigenetic aging: Biological age prediction and informing a mechanistic theory of aging

A Li, Z Koch, T Ideker - Journal of internal medicine, 2022 - Wiley Online Library
Numerous studies have shown that epigenetic age—an individual's degree of aging based
on patterns of DNA methylation—can be computed and is associated with an array of factors …

Novel positioning from obesity to cancer: FTO, an m6A RNA demethylase, regulates tumour progression

JL Chen, B Du - Journal of cancer research and clinical oncology, 2019 - Springer
Purpose The fat mass-and obesity-associated (FTO) gene on chromosome 16q12. 2 shows
an intimate association with obesity and body mass index. Recently, research into the FTO …

Rate, molecular spectrum, and consequences of human mutation

M Lynch - Proceedings of the National Academy of …, 2010 - National Acad Sciences
Although mutation provides the fuel for phenotypic evolution, it also imposes a substantial
burden on fitness through the production of predominantly deleterious alleles, a matter of …

Mutation patterns of human SARS-CoV-2 and bat RaTG13 coronavirus genomes are strongly biased towards C> U transitions, indicating rapid evolution in their hosts

R Matyášek, A Kovařík - Genes, 2020 - mdpi.com
The pandemic caused by the spread of SARS-CoV-2 has led to considerable interest in its
evolutionary origin and genome structure. Here, we analyzed mutation patterns in 34 human …

DNA methyltransferases, DNA methylation, and age-associated cognitive function

D Cui, X Xu - International journal of molecular sciences, 2018 - mdpi.com
Ageing, a leading cause of the decline/deficits in human learning, memory, and cognitive
abilities, is a major risk factor for age-associated neurodegenerative disorders such as …

Epigenetic genes and epilepsy—emerging mechanisms and clinical applications

KMJ Van Loo, GL Carvill, AJ Becker… - Nature Reviews …, 2022 - nature.com
An increasing number of epilepsies are being attributed to variants in genes with epigenetic
functions. The products of these genes include factors that regulate the structure and …

Patterns of evolution and host gene mimicry in influenza and other RNA viruses

BD Greenbaum, AJ Levine, G Bhanot… - PLoS …, 2008 - journals.plos.org
It is well known that the dinucleotide CpG is under-represented in the genomic DNA of many
vertebrates. This is commonly thought to be due to the methylation of cytosine residues in …

Regionally specific and genome-wide analyses conclusively demonstrate the absence of CpG methylation in human mitochondrial DNA

EE Hong, CY Okitsu, AD Smith… - Molecular and cellular …, 2013 - Am Soc Microbiol
Although CpG methylation clearly distributes genome-wide in vertebrate nuclear DNA, the
state of methylation in the vertebrate mitochondrial genome has been unclear. Several …

DNA sequence-dependent activity and base flipping mechanisms of DNMT1 regulate genome-wide DNA methylation

S Adam, H Anteneh, M Hornisch, V Wagner… - Nature …, 2020 - nature.com
DNA methylation maintenance by DNMT1 is an essential process in mammals but molecular
mechanisms connecting DNA methylation patterns and enzyme activity remain elusive …

Insects as innovative models for functional studies of DNA methylation

F Lyko, R Maleszka - Trends in genetics, 2011 - cell.com
The emerging field of epigenomics has the potential to bridge the gap between static
genomic sequences and complex phenotypes that arise from multigenic, nonlinear and …