High prevalence of multilocus pathogenic variation in neurodevelopmental disorders in the Turkish population

T Mitani, S Isikay, A Gezdirici, EY Gulec… - The American Journal of …, 2021 - cell.com
Neurodevelopmental disorders (NDDs) are clinically and genetically heterogenous; many
such disorders are secondary to perturbation in brain development and/or function. The …

Clinical genomics and contextualizing genome variation in the diagnostic laboratory

JR Lupski, P Liu, P Stankiewicz… - Expert review of …, 2020 - Taylor & Francis
Introduction The human genome contains the instructions for the development and
biological homeostasis of the human organism and the genetic transmission of traits …

Clan genomics: From OMIM phenotypic traits to genes and biology

JR Lupski - American Journal of Medical Genetics Part A, 2021 - Wiley Online Library
Clinical characterization of a patient phenotype has been the quintessential approach for
elucidating a differential diagnosis and a hypothesis to explore a potential clinical diagnosis …

HMZDupFinder: a robust computational approach for detecting intragenic homozygous duplications from exome sequencing data

H Du, Z Dardas, A Jolly, CM Grochowski… - Nucleic Acids …, 2024 - academic.oup.com
Homozygous duplications contribute to genetic disease by altering gene dosage or
disrupting gene regulation and can be more deleterious to organismal biology than …

The role of chromosomal microarray and exome sequencing in prenatal diagnosis

MHK Chau, KW Choy - Current Opinion in Obstetrics and …, 2021 - journals.lww.com
Data suggest exome sequencing for SNVs and CMA for CNV detection are the most
effective approach for prenatal genetic diagnosis. Emerging evidences show genome …

Clinical efficiency of simultaneous CNV-seq and whole-exome sequencing for testing fetal structural anomalies

X Chen, Y Jiang, R Chen, Q Qi, X Zhang… - Journal of translational …, 2022 - Springer
Background Birth defects are responsible for approximately 7% of neonatal deaths
worldwide by World Health Organization in 2004. Many methods have been utilized for …

Use of genome sequencing to hunt for cryptic second-hit variants: analysis of 31 cases recruited to the 100 000 Genomes Project

AR Moore, J Yu, Y Pei, EWY Cheng… - Journal of Medical …, 2023 - jmg.bmj.com
Background Current clinical testing methods used to uncover the genetic basis of rare
disease have inherent limitations, which can lead to causative pathogenic variants being …

Exome sequencing as a first-tier test for copy number variant detection: retrospective evaluation and prospective screening in 2418 cases

Q Testard, X Vanhoye, K Yauy, ME Naud… - Journal of Medical …, 2022 - jmg.bmj.com
Background Despite the availability of whole exome (WES) and genome sequencing (WGS),
chromosomal microarray (CMA) remains the first-line diagnostic test in most rare disorders …

De novo variants in H3-3A and H3-3B are associated with neurodevelopmental delay, dysmorphic features, and structural brain abnormalities

V Okur, Z Chen, L Vossaert, S Peacock… - NPJ Genomic …, 2021 - nature.com
The histone H3 variant H3. 3, encoded by two genes H3-3A and H3-3B, can replace
canonical isoforms H3. 1 and H3. 2. H3. 3 is important in chromatin compaction, early …

[HTML][HTML] Retrospective analysis of a clinical exome sequencing cohort reveals the mutational spectrum and identifies candidate disease–associated loci for …

CA Chen, J Lattier, W Zhu, J Rosenfeld, L Wang… - Genetics in …, 2022 - Elsevier
Purpose BRG1/BRM-associated factor (BAF) complex is a chromatin remodeling complex
that plays a critical role in gene regulation. Defects in the genes encoding BAF subunits lead …