Recent advances in oomycete genomics

J McGowan, DA Fitzpatrick - Advances in genetics, 2020 - Elsevier
The oomycetes are a class of ubiquitous, filamentous microorganisms that include some of
the biggest threats to global food security and natural ecosystems. Within the oomycete …

Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems

D Singer, CVW Seppey, G Lentendu, M Dunthorn… - Environment …, 2021 - Elsevier
Protists dominate eukaryotic diversity and play key functional roles in all ecosystems,
particularly by catalyzing carbon and nutrient cycling. To date, however, a comparative …

The role of horizontal gene transfer in the evolution of the oomycetes

F Savory, G Leonard, TA Richards - PLoS pathogens, 2015 - journals.plos.org
Horizontal gene transfer (HGT) or lateral gene transfer (LGT) involves the transmission of
genetic material between distinct evolutionary lineages and can be an important source of …

[图书][B] The fungal community: its organization and role in the ecosystem

J Dighton, JF White - 2017 - taylorfrancis.com
"… a number of chapters provide excellent summaries of the modern methods available for
studying fungal ecology, along with those more traditional methods that are still extremely …

Environment-dependent fitness gains can be driven by horizontal gene transfer of transporter-encoding genes

DS Milner, V Attah, E Cook, F Maguire… - Proceedings of the …, 2019 - National Acad Sciences
Many microbes acquire metabolites in a “feeding” process where complex polymers are
broken down in the environment to their subunits. The subsequent uptake of soluble …

Metabolic diversity and novelties in the oomycetes

HS Judelson - Annual Review of Microbiology, 2017 - annualreviews.org
The eukaryotic microbes called oomycetes include many important saprophytes and
pathogens, with the latter exhibiting necrotrophy, biotrophy, or obligate biotrophy …

Laterally transferred gene recruited as a venom in parasitoid wasps

EO Martinson, VG Martinson, R Edwards… - Molecular Biology …, 2016 - academic.oup.com
Parasitoid wasps use venom to manipulate the immunity and metabolism of their host
insects in a variety of ways to provide resources for their offspring. Yet, how genes are …

Duplication and neofunctionalization of a horizontally transferred xyloglucanase as a facet of the Red Queen coevolutionary dynamic

V Attah, DS Milner, Y Fang, X Yan… - Proceedings of the …, 2024 - National Acad Sciences
Oomycete protists share phenotypic similarities with fungi, including the ability to cause plant
diseases, but branch in a distant region of the tree of life. It has been suggested that multiple …

Comparative genomic analysis of the 'pseudofungus' Hyphochytrium catenoides

G Leonard, A Labarre, DS Milner, A Monier… - Open …, 2018 - royalsocietypublishing.org
Eukaryotic microbes have three primary mechanisms for obtaining nutrients and energy:
phagotrophy, photosynthesis and osmotrophy. Traits associated with the latter two functions …

Ancestral function and diversification of a horizontally acquired oomycete carboxylic acid transporter

FR Savory, DS Milner, DC Miles… - Molecular Biology and …, 2018 - academic.oup.com
Horizontal gene transfer (HGT) can equip organisms with novel genes, expanding the
repertoire of genetic material available for evolutionary innovation and allowing recipient …