RNA splicing by the spliceosome

ME Wilkinson, C Charenton… - Annual review of …, 2020 - annualreviews.org
The spliceosome removes introns from messenger RNA precursors (pre-mRNA). Decades
of biochemistry and genetics combined with recent structural studies of the spliceosome …

Alternative splicing regulatory networks: functions, mechanisms, and evolution

J Ule, BJ Blencowe - Molecular cell, 2019 - cell.com
High-throughput sequencing-based methods and their applications in the study of
transcriptomes have revolutionized our understanding of alternative splicing. Networks of …

A human postcatalytic spliceosome structure reveals essential roles of metazoan factors for exon ligation

SM Fica, C Oubridge, ME Wilkinson, AJ Newman… - Science, 2019 - science.org
During exon ligation, the Saccharomyces cerevisiae spliceosome recognizes the 3′-splice
site (3′ SS) of precursor messenger RNA (pre-mRNA) through non–Watson-Crick pairing …

Splicing factors control triple-negative breast cancer cell mitosis through SUN2 interaction and sororin intron retention

E Koedoot, E van Steijn, M Vermeer… - Journal of Experimental …, 2021 - Springer
Background Triple negative breast cancer (TNBC) is an aggressive subtype of breast cancer
with limited therapeutic opportunities. Recently, splicing factors have gained attention as …

Interaction of ubiquitin‐like protein SILENCING DEFECTIVE 2 with LIKE HETEROCHROMATIN PROTEIN 1 is required for regulation of anthocyanin biosynthesis in …

Z Zhang, C Liang, Y Ren, Z Lv, J Huang - New Phytologist, 2024 - Wiley Online Library
The regulatory mechanisms of anthocyanin biosynthesis have been well documented at the
transcriptional and translational levels. By contrast, how anthocyanin biosynthesis is …

The C‐degron pathway eliminates mislocalized proteins and products of deubiquitinating enzymes

CW Yeh, WC Huang, PH Hsu, KH Yeh, LC Wang… - The EMBO …, 2021 - embopress.org
Protein termini are determinants of protein stability. Proteins bearing degradation signals, or
degrons, at their amino‐or carboxyl‐termini are eliminated by the N‐or C‐degron pathways …

[HTML][HTML] An initiator codon mutation in SDE2 causes recessive embryonic lethality in Holstein cattle

S Fritz, C Hoze, E Rebours, A Barbat, M Bizard… - Journal of dairy …, 2018 - Elsevier
Researching depletions in homozygous genotypes for specific haplotypes among the large
cohorts of animals genotyped for genomic selection is a very efficient strategy to map …

Extended DNA-binding interfaces beyond the canonical SAP domain contribute to the function of replication stress regulator SDE2 at DNA replication forks

AS Weinheimer, YT Paung, J Rageul, A Khan… - Journal of Biological …, 2022 - ASBMB
Elevated DNA replication stress causes instability of the DNA replication fork and increased
DNA mutations, which underlies tumorigenesis. The DNA replication stress regulator …

The occurrence and function of alternative splicing in fungi

S Fang, X Hou, K Qiu, R He, X Feng, X Liang - Fungal Biology Reviews, 2020 - Elsevier
Alternative splicing is a common but complex posttranscriptional regulatory process in
eukaryotes, through which multiple different transcripts are produced from a single pre …

Convergent genomic signatures associated with vertebrate viviparity

RV Eastment, BBM Wong, MD McGee - BMC biology, 2024 - Springer
Background Viviparity—live birth—is a complex and innovative mode of reproduction that
has evolved repeatedly across the vertebrate Tree of Life. Viviparous species exhibit …