Camelid nanobodies: killing two birds with one stone

A Desmyter, S Spinelli, A Roussel… - Current opinion in …, 2015 - Elsevier
Highlights•Camelid nanobodies (or VHHs) facilitate proteins crystallization.•They
preferentially bind concave surfaces such as protein active sites or hinges.•They are easily …

Dihydrofolate reductase inhibitors for use as antimicrobial agents

J He, W Qiao, Q An, T Yang, Y Luo - European journal of medicinal …, 2020 - Elsevier
Drug-resistant bacteria pose an increasingly serious threat to mankind all over the world.
However, the currently available clinical treatments do not meet the urgent demand …

Single-domain near-infrared protein provides a scaffold for antigen-dependent fluorescent nanobodies

OS Oliinyk, M Baloban, CL Clark, E Carey, S Pletnev… - Nature …, 2022 - nature.com
Small near-infrared (NIR) fluorescent proteins (FPs) are much needed as protein tags for
imaging applications. We developed a 17 kDa NIR FP, called miRFP670nano3, which …

Nanobodies as probes for protein dynamics in vitro and in cells

OY Dmitriev, S Lutsenko, S Muyldermans - Journal of Biological Chemistry, 2016 - ASBMB
Nanobodies are the recombinant antigen-recognizing domains of the minimalistic heavy
chain-only antibodies produced by camels and llamas. Nanobodies can be easily …

Advances in NMR methods to map allosteric sites: from models to translation

S Boulton, G Melacini - Chemical Reviews, 2016 - ACS Publications
The last five years have witnessed major developments in the understanding of the allosteric
phenomenon, broadly defined as coupling between remote molecular sites. Such advances …

A nanobody that recognizes a 14-residue peptide epitope in the E2 ubiquitin-conjugating enzyme UBC6e modulates its activity

J Ling, RW Cheloha, N McCaul, ZYJ Sun… - Molecular …, 2019 - Elsevier
A substantial fraction of eukaryotic proteins is folded and modified in the endoplasmic
reticulum (ER) prior to export and secretion. Proteins that enter the ER but fail to fold …

Versatile design of intracellular protein-responsive translational regulation system for synthetic mRNA

H Nakanishi, H Saito, K Itaka - ACS Synthetic Biology, 2022 - ACS Publications
Synthetic mRNA (mRNA) enables transgene expression without the necessity of nuclear
import and the risk of insertional mutagenesis, which makes it an attractive tool for medical …

Chemical space of Escherichia coli dihydrofolate reductase inhibitors: New approaches for discovering novel drugs for old bugs

B Srinivasan*, S Tonddast‐Navaei… - Medicinal research …, 2019 - Wiley Online Library
Escherichia coli Dihydrofolate reductase is an important enzyme that is essential for the
survival of the Gram‐negative microorganism. Inhibitors designed against this enzyme have …

A fluorogenic array for temporally unlimited single-molecule tracking

RP Ghosh, JM Franklin, WE Draper, Q Shi… - Nature chemical …, 2019 - nature.com
We describe three optical tags, ArrayG, ArrayD and ArrayG/N, for intracellular tracking of
single molecules over milliseconds to hours. ArrayG is a fluorogenic tag composed of a …

[HTML][HTML] Prediction of protein allosteric signalling pathways and functional residues through paths of optimised propensity

N Wu, SN Yaliraki, M Barahona - Journal of Molecular Biology, 2022 - Elsevier
Allostery commonly refers to the mechanism that regulates protein activity through the
binding of a molecule at a different, usually distal, site from the orthosteric site. The …