Insights from the comparison of plant genome sequences
The next decade will see essentially completed sequences for multiple branches of virtually
all angiosperm clades that include major crops and/or botanical models. These sequences …
all angiosperm clades that include major crops and/or botanical models. These sequences …
The 'inner circle'of the cereal genomes
Early marker-based macrocolinearity studies between the grass genomes led to arranging
their chromosomes into concentric 'crop circles' of synteny blocks that initially consisted of 30 …
their chromosomes into concentric 'crop circles' of synteny blocks that initially consisted of 30 …
Genome sequence of the progenitor of wheat A subgenome Triticum urartu
Triticum urartu (diploid, AA) is the progenitor of the A subgenome of tetraploid (Triticum
turgidum, AABB) and hexaploid (Triticum aestivum, AABBDD) wheat,. Genomic studies of T …
turgidum, AABB) and hexaploid (Triticum aestivum, AABBDD) wheat,. Genomic studies of T …
The Sorghum bicolor genome and the diversification of grasses
Sorghum, an African grass related to sugar cane and maize, is grown for food, feed, fibre
and fuel. We present an initial analysis of the∼ 730-megabase Sorghum bicolor (L.) …
and fuel. We present an initial analysis of the∼ 730-megabase Sorghum bicolor (L.) …
Identification and validation of reference genes for quantitative RT-PCR normalization in wheat
AR Paolacci, OA Tanzarella, E Porceddu… - BMC molecular biology, 2009 - Springer
Background Usually the reference genes used in gene expression analysis have been
chosen for their known or suspected housekeeping roles, however the variation observed in …
chosen for their known or suspected housekeeping roles, however the variation observed in …
Comparison of SSR and SNP markers in estimation of genetic diversity and population structure of Indian rice varieties
Simple sequence repeat (SSR) and Single Nucleotide Polymorphic (SNP), the two most
robust markers for identifying rice varieties were compared for assessment of genetic …
robust markers for identifying rice varieties were compared for assessment of genetic …
Identification and characterization of shared duplications between rice and wheat provide new insight into grass genome evolution
J Salse, S Bolot, M Throude, V Jouffe, B Piegu… - The Plant …, 2008 - academic.oup.com
The grass family comprises the most important cereal crops and is a good system for
studying, with comparative genomics, mechanisms of evolution, speciation, and …
studying, with comparative genomics, mechanisms of evolution, speciation, and …
Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]
Abstract Background Pigeonpea [Cajanus cajan (L.) Millspaugh], one of the most important
food legumes of semi-arid tropical and subtropical regions, has limited genomic resources …
food legumes of semi-arid tropical and subtropical regions, has limited genomic resources …
The first draft of the pigeonpea genome sequence
Pigeonpea (Cajanus cajan) is an important grain legume of the Indian subcontinent, South-
East Asia and East Africa. More than eighty five percent of the world pigeonpea is produced …
East Asia and East Africa. More than eighty five percent of the world pigeonpea is produced …
Single-copy gene based 50 K SNP chip for genetic studies and molecular breeding in rice
Single nucleotide polymorphism (SNP) is the most abundant DNA sequence variation
present in plant genomes. Here, we report the design and validation of a unique genic-SNP …
present in plant genomes. Here, we report the design and validation of a unique genic-SNP …