Molecular dynamics simulations: advances and applications

HAL Filipe, LMS Loura - Molecules, 2022 - mdpi.com
Molecular dynamics (MD) simulations have led to great advances in many scientific
disciplines, such as chemical physics, materials science, and biophysics. This computational …

Quassinoids from Eurycoma longifolia as Potential Dihydrofolate Reductase Inhibitors: A Computational Study

NM Yunos, MG Al-Thiabat… - Current …, 2024 - benthamdirect.com
Background: Quassinoids are degraded triterpene compounds that can be obtained from
various species of the Simaroubaceae plant family, including Eurycoma longifolia …

tLyp–1: A peptide suitable to target NRP–1 receptor

L Larue, B Kenzhebayeva, MG Al-Thiabat… - Bioorganic …, 2023 - Elsevier
Targeting vascular endothelial growth factor receptor (VEFGR) and its co–receptor
neuropilin–1 (NRP–1) is an interesting vascular strategy. tLyp–1 is a tumor–homing and …

Potential Serotonin 5-HT2A Receptor Agonist of Psychoactive Components of Silene undulata Aiton: LC-MS/MS, ADMET, and Molecular Docking Studies

MB Alhawarri, S Olimat - Current Pharmaceutical Biotechnology, 2025 - benthamdirect.com
Background Silene undulata is historically used for inducing vivid and prophetic lucid
dreams, but limited information exists on its phytochemical composition and potential …

[HTML][HTML] DFT study of carboplatin encapsulation interactions with carboxylated carbon nanotubes and conjugated to folic acid for targeted nano delivery systems

U Hani, B Huwaimel, AM Alsubaiyel… - Alexandria Engineering …, 2023 - Elsevier
In this study, a nano-drug delivery design based on (8, 8) carboxylated single-walled carbon
nanotube (CNT-COOH) and folic acid (FA) decorated on CNT-COOH (CNT-FA) were …

Design, molecular docking, and molecular dynamics of thiourea-iron (III) metal complexes as NUDT5 inhibitors for breast cancer treatment

R Ruswanto, T Nofianti, R Mardianingrum, D Kesuma - Heliyon, 2022 - cell.com
In research, anticancer agents, such as thiourea derivative compounds, and metal
complexes, such as those complexed with iron (III) metal, are often studied. The metal …

Advancements and Perspectives in Folate‐Based Anticancer Drugs: Bridging Quantum and Classical Mechanics in Folate Receptor Research

AJ Josiah, KK Govender, PP Govender… - Advanced Theory …, 2024 - Wiley Online Library
This review highlights the role of computational chemistry, specifically quantum and
molecular mechanics, in the development of folate‐based anticancer drugs. Folate receptors …

[HTML][HTML] Computational Insight of Oleracone L, Portulacatone B, and Portulacatal from Portulaca oleracea L. as Potential Anticholinesterase Inhibitors for Alzheimer's

SO Alshammari - Processes, 2024 - mdpi.com
Alzheimer's disease, characterized by a decline in cognitive functions, is frequently
associated with decreased levels of acetylcholine due to the overactivity of …

ADME profiling, molecular docking, DFT, and MEP analysis reveal cissamaline, cissamanine, and cissamdine from Cissampelos capensis Lf as potential anti …

MB Alhawarri, MG Al-Thiabat, A Dubey, A Tufail… - RSC …, 2024 - pubs.rsc.org
The current pharmacotherapies for Alzheimer's disease (AD) demonstrate limited efficacy
and are associated with various side effects, highlighting the need for novel therapeutic …

Synthesis, characterization and bioactivity of new pyridine-2(H)-one, nicotinonitrile, and furo[2,3-b]pyridine derivatives

MM Ibrahim, MN Azmi, MB Alhawarri, NNSNM Kamal… - Molecular Diversity, 2024 - Springer
Pyridone heterocycles, such as furo [2, 3-b] pyridines, have emerged as prominent scaffolds
in medicinal chemistry due to their versatile pharmacological properties, including significant …