The Japanese encephalitis antigenic complex viruses: from structure to immunity

B Khare, RJ Kuhn - Viruses, 2022 - mdpi.com
In the last three decades, several flaviviruses of concern that belong to different antigenic
groups have expanded geographically. This has resulted in the presence of often more than …

CD4 T cell responses to flaviviruses

JH Aberle, M Koblischke, K Stiasny - Journal of Clinical Virology, 2018 - Elsevier
Flaviviruses pose an increasing threat to global health with their potential to cause severe
disease in millions of people. Protective and long-lived immunity is closely linked to the …

Structural influence on the dominance of virus-specific CD4 T cell epitopes in Zika virus infection

M Koblischke, K Stiasny, SW Aberle, S Malafa… - Frontiers in …, 2018 - frontiersin.org
Zika virus (ZIKV) has recently caused explosive outbreaks in Pacific islands, South-and
Central America. Like with other flaviviruses, protective immunity is strongly dependent on …

Structural Framework for Analysis of CD4+ T-Cell Epitope Dominance in Viral Fusion Proteins

SJ Landry, RR Mettu, JK Kolls, JH Aberle, E Norton… - Biochemistry, 2023 - ACS Publications
Antigen conformation shapes CD4+ T-cell specificity through mechanisms of antigen
processing, and the consequences for immunity may rival those from conformational effects …

Incorporating antigen processing into CD4+ T cell epitope prediction with integer linear programming

A Bhattacharya, MC Lyons, SJ Landry… - Proceedings of the 13th …, 2022 - dl.acm.org
CD4+ T-cell receptors recognize peptide-MHCII complexes displayed on the surface of
antigen-presenting cells to induce an immune response. A fundamental problem in …

CD4 T Cell Determinants in West Nile Virus Disease and Asymptomatic Infection

M Koblischke, FS Spitzer, DM Florian… - Frontiers in …, 2020 - frontiersin.org
West Nile (WN) virus infection of humans is frequently asymptomatic, but can also lead to
WN fever or neuroinvasive disease. CD4 T cells and B cells are critical in the defense …

[PDF][PDF] The Japanese Encephalitis Antigenic Complex Viruses: From Structure to Immunity. Viruses 2022, 14, 2213

B Khare, RJ Kuhn - 2022 - pdfs.semanticscholar.org
In the last three decades, several flaviviruses of concern that belong to different antigenic
groups have expanded geographically. This has resulted in the presence of often more than …

CD4+ T Cell Depletion Before Primary Dengue and/or Secondary Zika Infection Reveals Mechanistic Correlates of Antibody Functionality in Rhesus Macaques

C Serrano-Collazo, A Miranda, LA Cruz, S Henein… - bioRxiv, 2024 - biorxiv.org
Dengue (DENV) virus and Zika virus (ZIKV) are two flaviviruses of major public health
concern. One drawback designing effective vaccines is our limited understanding of the …

Parallel Computation of Conformational Stability for CD4+ T-cell Epitope Prediction

A Bhattacharya, JO Wrabl, SJ Landry… - … on Bioinformatics and …, 2023 - ieeexplore.ieee.org
Antigen-presenting cells present peptides derived from foreign pathogens in the form of
peptide-MHCII complexes to induce immune response. Two important and interrelated …

Computational Methods for CD4+ T-Cell Epitope Prediction Based on Antigen Processing

A Bhattacharya - 2023 - search.proquest.com
The adaptive immune system plays an important role in protecting us from diseases caused
by pathogens and cancers. An important component of the adaptive immune system is the …