Spectroscopy in complex environments from QM–MM simulations

UN Morzan, DJ Alonso de Armino, NO Foglia… - Chemical …, 2018 - ACS Publications
The applications of multiscale quantum–classical (QM–MM) approaches have shown an
extraordinary expansion and diversification in the last couple of decades. A great proportion …

Unified formulation of phase space mapping approaches for nonadiabatic quantum dynamics

J Liu, X He, B Wu - Accounts of chemical research, 2021 - ACS Publications
Conspectus Nonadiabatic dynamical processes are one of the most important quantum
mechanical phenomena in chemical, materials, biological, and environmental molecular …

Electronic Absorption Spectra from MM and ab Initio QM/MM Molecular Dynamics: Environmental Effects on the Absorption Spectrum of Photoactive Yellow Protein

CM Isborn, AW Gotz, MA Clark, RC Walker… - Journal of chemical …, 2012 - ACS Publications
We describe a new interface of the GPU parallelized Terachem electronic structure package
and the Amber molecular dynamics package for quantum mechanical (QM) and mixed QM …

Boltzmann-conserving classical dynamics in quantum time-correlation functions:“Matsubara dynamics”

TJH Hele, MJ Willatt, A Muolo… - The Journal of Chemical …, 2015 - pubs.aip.org
We show that a single change in the derivation of the linearized semiclassical-initial value
representation (LSC-IVR or “classical Wigner approximation”) results in a classical dynamics …

New phase space formulations and quantum dynamics approaches

X He, B Wu, Y Shang, B Li, X Cheng… - Wiley Interdisciplinary …, 2022 - Wiley Online Library
We report recent progress on the phase space formulation of quantum mechanics with
coordinate‐momentum variables, focusing more on new theory of (weighted) constraint …

[HTML][HTML] Ring polymer quantization of the photon field in polariton chemistry

SN Chowdhury, A Mandal, P Huo - The Journal of Chemical Physics, 2021 - pubs.aip.org
We use the ring polymer (RP) representation to quantize the radiation field inside an optical
cavity to investigate polariton quantum dynamics. Using a charge transfer model coupled to …

Commutator matrix in phase space mapping models for nonadiabatic quantum dynamics

X He, B Wu, Z Gong, J Liu - The Journal of Physical Chemistry A, 2021 - ACS Publications
We show that a novel, general phase space mapping Hamiltonian for nonadiabatic systems,
which is reminiscent of the renowned Meyer–Miller mapping Hamiltonian, involves a …

Ring polymer surface hopping: Incorporating nuclear quantum effects into nonadiabatic molecular dynamics simulations

FA Shakib, P Huo - The Journal of Physical Chemistry Letters, 2017 - ACS Publications
We apply a recently proposed ring polymer surface hopping (RPSH) approach to investigate
the real-time nonadiabatic dynamics with explicit nuclear quantum effects. The nonadibatic …

Recent advances in the linearized semiclassical initial value representation/classical W igner model for the thermal correlation function

J Liu - International Journal of Quantum Chemistry, 2015 - Wiley Online Library
This article focuses on most recent advances in the linearized semiclassical initial value
representation (LSC‐IVR)/classical Wigner model that includes quantum effects with …

Anharmonic spectral features via trajectory-based quantum dynamics: A perturbative analysis of the interplay between dynamics and sampling

T Plé, S Huppert, F Finocchi, P Depondt… - The Journal of Chemical …, 2021 - pubs.aip.org
The performance of different approximate algorithms for computing anharmonic features in
vibrational spectra is analyzed and compared on model and more realistic systems that …