Integrated approach to structure-based enzymatic drug design: molecular modeling, spectroscopy, and experimental bioactivity

B Honarparvar, T Govender, GEM Maguire… - Chemical …, 2014 - ACS Publications
Analysis of the literature involving computational modeling of diseases and drug design with
the aid of experimental spectroscopic techniques reveals that this specific combination of …

New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays

JB Baell, GA Holloway - Journal of medicinal chemistry, 2010 - ACS Publications
This report describes a number of substructural features which can help to identify
compounds that appear as frequent hitters (promiscuous compounds) in many biochemical …

Docking-based virtual screening: recent developments

T Tuccinardi - Combinatorial chemistry & high throughput …, 2009 - ingentaconnect.com
Virtual (database) screening (VS) of molecules promises to accelerate the discovery of new
drugs and reduce costs by identifying molecules with high probabilities of binding to a target …

Pharmacophore modeling and virtual screening studies for new VEGFR-2 kinase inhibitors

K Lee, KW Jeong, Y Lee, JY Song, MS Kim… - European journal of …, 2010 - Elsevier
Virtual screening was performed to determine potent vascular endothelial growth factor
receptor (VEGFR)-2 kinase inhibitors. A database of approximately 820,000 commercial …

Development of anti-viral agents using molecular modeling and virtual screening techniques

J Kirchmair, S Distinto, K Roman Liedl… - … Current Drug Targets …, 2011 - ingentaconnect.com
Computational chemistry has always played a key role in anti-viral drug development. The
challenges and the quickly rising public interest when a virus is becoming a threat has …

Identification of SARS‐CoV‐2 Papain‐like Protease (PLpro) Inhibitors Using Combined Computational Approach

M Sencanski, V Perovic, J Milicevic… - …, 2022 - Wiley Online Library
In the current pandemic, finding an effective drug to prevent or treat the infection is the
highest priority. A rapid and safe approach to counteract COVID‐19 is in silico drug …

Natural products as promising therapeutics for treatment of influenza disease

M Sencanski, D Radosevic, V Perovic… - Current …, 2015 - ingentaconnect.com
The influenza virus represents a permanent global health threat because it circulates not
only within but also between numerous host populations, thereby frequently causing …

Virtual screen for repurposing of drugs for candidate influenza a M2 ion-channel inhibitors

D Radosevic, M Sencanski, V Perovic… - Frontiers in Cellular …, 2019 - frontiersin.org
Influenza A virus (IAV) matrix protein 2 (M2), an ion channel, is crucial for virus infection, and
therefore, an important anti-influenza drug target. Adamantanes, also known as M2 channel …

The role of long-range intermolecular interactions in discovery of new drugs

N Veljkovic, S Glisic, V Perovic… - Expert Opinion on Drug …, 2011 - Taylor & Francis
Introduction: Long-range intermolecular interactions (interactions at distances between 100
and 1000 Å) play an important role in the interaction between drugs and therapeutic targets …

Discovery of new therapeutic targets by the informational spectrum method

N Veljkovic, S Glisic, J Prljic, V Perovic… - Current Protein and …, 2008 - ingentaconnect.com
The field of bioinformatics has become a major part of the drug discovery pipeline playing a
key role in improvement and acceleration of this time and money consuming process. Here …