Large language models on graphs: A comprehensive survey

B Jin, G Liu, C Han, M Jiang, H Ji… - IEEE Transactions on …, 2024 - ieeexplore.ieee.org
Large language models (LLMs), such as GPT4 and LLaMA, are creating significant
advancements in natural language processing, due to their strong text encoding/decoding …

Towards data-centric graph machine learning: Review and outlook

X Zheng, Y Liu, Z Bao, M Fang, X Hu, AWC Liew… - arXiv preprint arXiv …, 2023 - arxiv.org
Data-centric AI, with its primary focus on the collection, management, and utilization of data
to drive AI models and applications, has attracted increasing attention in recent years. In this …

Graph data augmentation for graph machine learning: A survey

T Zhao, W Jin, Y Liu, Y Wang, G Liu… - arXiv preprint arXiv …, 2022 - arxiv.org
Data augmentation has recently seen increased interest in graph machine learning given its
demonstrated ability to improve model performance and generalization by added training …

Graph foundation models

H Mao, Z Chen, W Tang, J Zhao, Y Ma, T Zhao… - arXiv preprint arXiv …, 2024 - arxiv.org
Graph Foundation Model (GFM) is a new trending research topic in the graph domain,
aiming to develop a graph model capable of generalizing across different graphs and tasks …

Semi-supervised graph imbalanced regression

G Liu, T Zhao, E Inae, T Luo, M Jiang - Proceedings of the 29th ACM …, 2023 - dl.acm.org
Data imbalance is easily found in annotated data when the observations of certain
continuous label values are difficult to collect for regression tasks. When they come to …

Optimizing ood detection in molecular graphs: A novel approach with diffusion models

X Shen, Y Wang, K Zhou, S Pan, X Wang - Proceedings of the 30th ACM …, 2024 - dl.acm.org
Despite the recent progress of molecular representation learning, its effectiveness is
assumed on the close-world assumptions that training and testing graphs are from identical …

Motif-aware attribute masking for molecular graph pre-training

E Inae, G Liu, M Jiang - arXiv preprint arXiv:2309.04589, 2023 - arxiv.org
Attribute reconstruction is used to predict node or edge features in the pre-training of graph
neural networks. Given a large number of molecules, they learn to capture structural …

TDNetGen: Empowering Complex Network Resilience Prediction with Generative Augmentation of Topology and Dynamics

C Liu, J Ding, Y Song, Y Li - Proceedings of the 30th ACM SIGKDD …, 2024 - dl.acm.org
Predicting the resilience of complex networks, which represents the ability to retain
fundamental functionality amidst external perturbations or internal failures, plays a critical …

Rationalizing graph neural networks with data augmentation

G Liu, E Inae, T Luo, M Jiang - ACM Transactions on Knowledge …, 2024 - dl.acm.org
Graph rationales are representative subgraph structures that best explain and support the
graph neural network (GNN) predictions. Graph rationalization involves the joint …

Inverse molecular design with multi-conditional diffusion guidance

G Liu, J Xu, T Luo, M Jiang - arXiv e-prints, 2024 - ui.adsabs.harvard.edu
Inverse molecular design with diffusion models holds great potential for advancements in
material and drug discovery. Despite success in unconditional molecule generation …