A tutorial for information theory in neuroscience

NM Timme, C Lapish - eneuro, 2018 - eneuro.org
Understanding how neural systems integrate, encode, and compute information is central to
understanding brain function. Frequently, data from neuroscience experiments are …

Bits from brains for biologically inspired computing

M Wibral, JT Lizier, V Priesemann - Frontiers in Robotics and AI, 2015 - frontiersin.org
Inspiration for artificial biologically inspired computing is often drawn from neural systems.
This article shows how to analyze neural systems using information theory with the aim of …

[图书][B] Transfer entropy

T Bossomaier, L Barnett, M Harré, JT Lizier… - 2016 - Springer
Transfer Entropy Page 1 Chapter 4 Transfer Entropy In this chapter we get to the essential
mathematics of the book—a detailed discussion of transfer entropy. To begin with we look at …

Transfer entropy—a model-free measure of effective connectivity for the neurosciences

R Vicente, M Wibral, M Lindner, G Pipa - Journal of computational …, 2011 - Springer
Understanding causal relationships, or effective connectivity, between parts of the brain is of
utmost importance because a large part of the brain's activity is thought to be internally …

JIDT: An information-theoretic toolkit for studying the dynamics of complex systems

JT Lizier - Frontiers in Robotics and AI, 2014 - frontiersin.org
Complex systems are increasingly being viewed as distributed information processing
systems, particularly in the domains of computational neuroscience, bioinformatics, and …

Phase transfer entropy: a novel phase-based measure for directed connectivity in networks coupled by oscillatory interactions

M Lobier, F Siebenhühner, S Palva, JM Palva - Neuroimage, 2014 - Elsevier
We introduce here phase transfer entropy (Phase TE) as a measure of directed connectivity
among neuronal oscillations. Phase TE quantifies the transfer entropy between phase time …

HERMES: towards an integrated toolbox to characterize functional and effective brain connectivity

G Niso, R Bruña, E Pereda, R Gutiérrez, R Bajo… - Neuroinformatics, 2013 - Springer
The analysis of the interdependence between time series has become an important field of
research in the last years, mainly as a result of advances in the characterization of …

Spectral dynamic causal modeling: A didactic introduction and its relationship with functional connectivity

L Novelli, K Friston, A Razi - Network Neuroscience, 2024 - direct.mit.edu
We present a didactic introduction to spectral dynamic causal modeling (DCM), a Bayesian
state-space modeling approach used to infer effective connectivity from noninvasive …

Large-scale directed network inference with multivariate transfer entropy and hierarchical statistical testing

L Novelli, P Wollstadt, P Mediano, M Wibral… - Network …, 2019 - direct.mit.edu
Network inference algorithms are valuable tools for the study of large-scale neuroimaging
datasets. Multivariate transfer entropy is well suited for this task, being a model-free measure …

Information dynamics in neuromorphic nanowire networks

R Zhu, J Hochstetter, A Loeffler, A Diaz-Alvarez… - Scientific reports, 2021 - nature.com
Neuromorphic systems comprised of self-assembled nanowires exhibit a range of neural-
like dynamics arising from the interplay of their synapse-like electrical junctions and their …