Metagenomic profiling pipelines improve taxonomic classification for 16S amplicon sequencing data

AR Odom, T Faits, E Castro-Nallar, KA Crandall… - Scientific reports, 2023 - nature.com
Most experiments studying bacterial microbiomes rely on the PCR amplification of all or part
of the gene for the 16S rRNA subunit, which serves as a biomarker for identifying and …

Type 2 diabetes, gut microbiome, and systems biology: A novel perspective for a new era

YE Martínez-López, DA Esquivel-Hernández… - Gut …, 2022 - Taylor & Francis
The association between the physio-pathological variables of type 2 diabetes (T2D) and gut
microbiota composition suggests a new avenue to track the disease and improve the …

Comparative analysis of metagenomics and metataxonomics for the characterization of vermicompost microbiomes

M Pérez-Losada, DB Narayanan, AR Kolbe… - Frontiers in …, 2022 - frontiersin.org
The study of microbial communities or microbiotas in animals and environments is important
because of their impact in a broad range of industrial applications, diseases and ecological …

Metagenomic profiling pipelines improve taxonomic classification for 16S amplicon sequencing data

T Faits, AR Odom-Mabey, E Castro-Nallar, KA Crandall… - bioRxiv, 2022 - biorxiv.org
Most experiments studying bacterial microbiomes rely on the PCR amplification of all or part
of the gene for the 16S rRNA subunit, which serves as a biomarker for identifying and …

[PDF][PDF] Panchagavya-Derived Brevibacillus brevis S1-3: Insights from the Draft Genome on its Antimicrobial and Plant Growth-Promoting Ability.

S Sattanathan, V Sriraman, J Jemina… - Journal of Pure & …, 2024 - pdfs.semanticscholar.org
Panchagavya has traditionally been used in Indian Ayurvedic practices because of its pro-
agricultural and medicinal properties. This study presents the draft genome of a new …

[PDF][PDF] METAGENOMICS: SEQUENCING TECHNOLOGIES AND BIOINFORMATICS TOOLS

A RAZA, A SHAHZAD, D GULZAR… - ANIMAL …, 2024 - researchgate.net
Metagenomics has transformed microbial community studies by allowing analysis of both
culturable and unculturable organisms in various environments. This chapter reviews …

Methods and tools for characterizing microbial communities in the context of chronic diseases

AR Odom - 2024 - open.bu.edu
The human microbiome, a complex ecosystem of microorganisms inhabiting various body
sites, plays a crucial role in the immune system and overall human health. A comprehensive …