A survey of MRI-based medical image analysis for brain tumor studies

S Bauer, R Wiest, LP Nolte… - Physics in Medicine & …, 2013 - iopscience.iop.org
MRI-based medical image analysis for brain tumor studies is gaining attention in recent
times due to an increased need for efficient and objective evaluation of large amounts of …

Fully automatic segmentation of brain tumor images using support vector machine classification in combination with hierarchical conditional random field …

S Bauer, LP Nolte, M Reyes - … , Toronto, Canada, September 18-22, 2011 …, 2011 - Springer
Delineating brain tumor boundaries from magnetic resonance images is an essential task for
the analysis of brain cancer. We propose a fully automatic method for brain tissue …

Integrated PK-PD and agent-based modeling in oncology

Z Wang, JD Butner, V Cristini, TS Deisboeck - Journal of pharmacokinetics …, 2015 - Springer
Mathematical modeling has become a valuable tool that strives to complement conventional
biomedical research modalities in order to predict experimental outcome, generate new …

Multiscale modeling for image analysis of brain tumor studies

S Bauer, C May, D Dionysiou… - IEEE transactions on …, 2011 - ieeexplore.ieee.org
Image-based modeling of tumor growth combines methods from cancer simulation and
medical imaging. In this context, we present a novel approach to adapt a healthy brain atlas …

[HTML][HTML] Navigating multi-scale cancer systems biology towards model-driven clinical oncology and its applications in personalized therapeutics

MN Gondal, SU Chaudhary - Frontiers in Oncology, 2021 - frontiersin.org
Rapid advancements in high-throughput omics technologies and experimental protocols
have led to the generation of vast amounts of scale-specific biomolecular data on cancer …

Clinical implications of in silico mathematical modeling for glioblastoma: a critical review

M Protopapa, A Zygogianni, GS Stamatakos… - Journal of neuro …, 2018 - Springer
Glioblastoma remains a clinical challenge in spite of years of extensive research. Novel
approaches are needed in order to integrate the existing knowledge. This is the potential …

Semantic biomedical resource discovery: a Natural Language Processing framework

P Sfakianaki, L Koumakis, S Sfakianakis… - BMC medical informatics …, 2015 - Springer
Background A plethora of publicly available biomedical resources do currently exist and are
constantly increasing at a fast rate. In parallel, specialized repositories are been developed …

High-grade glioma diffusive modeling using statistical tissue information and diffusion tensors extracted from atlases

A Roniotis, GC Manikis, V Sakkalis… - IEEE Transactions …, 2011 - ieeexplore.ieee.org
Glioma, especially glioblastoma, is a leading cause of brain cancer fatality involving highly
invasive and neoplastic growth. Diffusive models of glioma growth use variations of the …

Molecular dynamics simulation reveals structural and thermodynamic features of kinase activation by cancer mutations within the epidermal growth factor receptor

S Wan, PV Coveney - Journal of computational chemistry, 2011 - Wiley Online Library
The epidermal growth factor receptor (EGFR) is a major target for drugs in treating lung
carcinoma as it promotes cell growth and tumor progression. Structural studies have …

Simulating radiotherapy effect in high‐grade glioma by using diffusive modeling and brain atlases

A Roniotis, K Marias, V Sakkalis… - BioMed Research …, 2012 - Wiley Online Library
Applying diffusive models for simulating the spatiotemporal change of concentration of
tumour cells is a modern application of predictive oncology. Diffusive models are used for …