Successes and challenges of HIV prevention in men who have sex with men

PS Sullivan, A Carballo-Diéguez, T Coates… - The Lancet, 2012 - thelancet.com
Men who have sex with men (MSM) have been substantially affected by HIV epidemics
worldwide. Epidemics in MSM are re-emerging in many high-income countries and gaining …

Antiretroviral therapy for prevention of HIV transmission in HIV‐discordant couples

A Anglemyer, GW Rutherford, T Horvath… - Cochrane database …, 2013 - cochranelibrary.com
Background Antiretroviral drugs have been shown to reduce risk of mother‐to‐child
transmission of human immunodeficiency virus (HIV) and are also widely used for post …

[HTML][HTML] Antiretroviral therapy for the prevention of HIV-1 transmission

MS Cohen, YQ Chen, M McCauley… - … England Journal of …, 2016 - Mass Medical Soc
Background An interim analysis of data from the HIV Prevention Trials Network (HPTN) 052
trial showed that antiretroviral therapy (ART) prevented more than 96% of genetically linked …

[HTML][HTML] Prevention of HIV-1 infection with early antiretroviral therapy

MS Cohen, YQ Chen, M McCauley… - New England journal …, 2011 - Mass Medical Soc
Background Antiretroviral therapy that reduces viral replication could limit the transmission
of human immunodeficiency virus type 1 (HIV-1) in serodiscordant couples. Methods In nine …

Increased risk of HIV acquisition among women throughout pregnancy and during the postpartum period: a prospective per-coital-act analysis among women with HIV …

KA Thomson, J Hughes, JM Baeten… - The Journal of …, 2018 - academic.oup.com
Background Understanding the absolute and relative risk of human immunodeficiency virus
type 1 (HIV) acquisition during pregnancy and the postpartum period can inform HIV …

Antiretroviral treatment of HIV-1 prevents transmission of HIV-1: where do we go from here?

MS Cohen, MK Smith, KE Muessig, TB Hallett… - The Lancet, 2013 - thelancet.com
Antiretroviral drugs that inhibit viral replication were expected to reduce transmission of HIV
by lowering the concentration of HIV in the genital tract. In 11 of 13 observational studies …

[HTML][HTML] TreeCluster: Clustering biological sequences using phylogenetic trees

M Balaban, N Moshiri, U Mai, X Jia, S Mirarab - PloS one, 2019 - journals.plos.org
Clustering homologous sequences based on their similarity is a problem that appears in
many bioinformatics applications. The fact that sequences cluster is ultimately the result of …

Defining HIV-1 transmission clusters based on sequence data

AS Hassan, OG Pybus, EJ Sanders, J Albert… - Aids, 2017 - journals.lww.com
Understanding HIV-1 transmission dynamics is relevant to both screening and intervention
strategies of HIV-1 infection. Commonly, HIV-1 transmission chains are determined based …

[HTML][HTML] Challenges and opportunities in estimating viral genetic diversity from next-generation sequencing data

N Beerenwinkel, HF Günthard, V Roth… - Frontiers in …, 2012 - frontiersin.org
Many viruses, including the clinically relevant RNA viruses HIV (human immunodeficiency
virus) and HCV (hepatitis C virus), exist in large populations and display high genetic …

[HTML][HTML] Systematic review of HIV transmission between heterosexual serodiscordant couples where the HIV-positive partner is fully suppressed on antiretroviral …

MR Loutfy, W Wu, M Letchumanan, L Bondy… - PloS one, 2013 - journals.plos.org
Background The risk of sexual HIV transmission in serodiscordant couples when the HIV-
positive partner has full virologic suppression on combination antiretroviral therapy (cART) is …