The diversification of methods for studying cell–cell interactions and communication

E Armingol, HM Baghdassarian, NE Lewis - Nature Reviews Genetics, 2024 - nature.com
No cell lives in a vacuum, and the molecular interactions between cells define most
phenotypes. Transcriptomics provides rich information to infer cell–cell interactions and …

Recent advances in genome mining and synthetic biology for discovery and biosynthesis of natural products

M Wang, L Chen, Z Zhang, Q Wang - Critical Reviews in …, 2025 - Taylor & Francis
Natural products have long served as critical raw materials in chemical and pharmaceutical
manufacturing, primarily which can provide superior scaffolds or intermediates for drug …

Supercoiling-mediated feedback rapidly couples and tunes transcription

CP Johnstone, KE Galloway - Cell reports, 2022 - cell.com
Transcription induces a wave of DNA supercoiling, altering the binding affinity of RNA
polymerases and reshaping the biochemical landscape of gene regulation. As supercoiling …

Precise programming of multigene expression stoichiometry in mammalian cells by a modular and programmable transcriptional system

C Qin, Y Xiang, J Liu, R Zhang, Z Liu, T Li… - Nature …, 2023 - nature.com
Context-dependency of mammalian transcriptional elements has hindered the quantitative
investigation of multigene expression stoichiometry and its biological functions. Here, we …

Ultra-high throughput mapping of genetic design space

RW O'Connell, K Rai, TC Piepergerdes, Y Wang… - BioRxiv, 2023 - biorxiv.org
Massively parallel genetic screens have been used to map sequence-to-function
relationships for a variety of genetic elements. However, because these approaches only …

Integrating bioelectronics with cell-based synthetic biology

J Rivnay, R Raman, JT Robinson, C Schreib… - Nature Reviews …, 2025 - nature.com
Biohybrid devices based on engineered cells interfaced with bioelectronics represent a
promising union where the strengths of each field can be synergistically combined, resulting …

Accelerating Diverse Cell-Based Therapies Through Scalable Design

EL Peterman, D Ploessl… - Annual Review of …, 2024 - annualreviews.org
Augmenting cells with novel, genetically encoded functions will support therapies that
expand beyond natural capacity for immune surveillance and tissue regeneration. However …

The design of 2DOF IMC-PID controller in biochemical reaction networks

Y Li, H Lv, X Wang - Applied Sciences, 2023 - mdpi.com
DNA molecules can be adopted to design biomolecular control circuits that can effectively
control biochemical reaction processes. However, the leak reaction in actual biochemical …

Overstatements and understatements in the debate on synthetic biology, bioterrorism and ethics

A Melin - Frontiers in bioengineering and biotechnology, 2021 - frontiersin.org
Synthetic biology has many valuable applications, but it also gives rise to certain risks. In this
paper I discuss the risk of bioterrorism, which often attracts attention in both the mass media …

[PDF][PDF] Prospects of synthetic biology in revolutionizing microbial synthesis and drug discovery

EC Ezeako, AY Solomon, YB Itam - Life Res, 2025 - researchgate.net
Synthetic biology (SynBio) is an emerging field of study with great potential in designing,
engineering, and constructing new microbial synthetic cells that do not pre-exist in nature or …