Tools for sequence-based miRNA target prediction: what to choose?

ÁL Riffo-Campos, I Riquelme… - International journal of …, 2016 - mdpi.com
MicroRNAs (miRNAs) are defined as small non-coding RNAs~ 22 nt in length. They regulate
gene expression at a post-transcriptional level through complementary base pairing with the …

MicroRNA–mRNA networks in pregnancy complications: A comprehensive downstream analysis of potential biomarkers

A Ali, F Hadlich, MW Abbas, MA Iqbal… - International journal of …, 2021 - mdpi.com
Pregnancy complications are a major cause of fetal and maternal morbidity and mortality in
humans. The majority of pregnancy complications initiate due to abnormal placental …

Overview of microRNA-199a regulation in cancer

Q Wang, B Ye, P Wang, F Yao, C Zhang… - Cancer Management …, 2019 - Taylor & Francis
Abstract microRNAs (miRNAs) are a class of endogenous short, non-coding RNAs that
regulate a multitude of genes at the post-transcriptional level. miR-199, which is a highly …

[HTML][HTML] Circular RNA circLGMN facilitates glioblastoma progression by targeting miR-127-3p/LGMN axis

B Chen, M Wang, R Huang, K Liao, T Wang, R Yang… - Cancer Letters, 2021 - Elsevier
Glioblastoma (GBM) is one of the most devastating cancers and is characterized by rapid
cell proliferation and aggressive invasiveness. Legumain (LGMN), a substrate-specific …

On the rules of engagement for microRNAs targeting protein coding regions

S Sapkota, KA Pillman, BK Dredge, D Liu… - Nucleic Acids …, 2023 - academic.oup.com
MiRNAs post-transcriptionally repress gene expression by binding to mRNA 3′ UTRs, but
the extent to which they act through protein coding regions (CDS regions) is less well …

[HTML][HTML] Landscape of RNAs in human lumbar disc degeneration

PH Lan, ZH Liu, YJ Pei, ZG Wu, Y Yu, YF Yang, X Liu… - Oncotarget, 2016 - ncbi.nlm.nih.gov
Accumulating evidence indicates noncoding RNAs (ncRNAs) fine-tune gene expression
with mysterious machinery. We conducted a combination of mRNA, miRNA, circRNA …

A mixed antagonistic/synergistic miRNA repression model enables accurate predictions of multi-input miRNA sensor activity

JJ Gam, J Babb, R Weiss - Nature communications, 2018 - nature.com
MicroRNAs (miRNAs) regulate a majority of protein-coding genes, affecting nearly all
biological pathways. However, the quantitative dimensions of miRNA-based regulation are …

Interferons induce expression of SAMHD1 in monocytes through down-regulation of miR-181a and miR-30a

M Riess, NV Fuchs, A Idica, M Hamdorf, E Flory… - Journal of Biological …, 2017 - ASBMB
SAMHD1 is a phosphohydrolase maintaining cellular dNTP homeostasis but also acts as a
critical regulator in innate immune responses due to its antiviral activity and association with …

Regulation of human UDP-glycosyltransferase (UGT) genes by miRNAs

DG Hu, PI Mackenzie, JA Hulin… - Drug metabolism …, 2022 - Taylor & Francis
The human UGT gene superfamily is divided into four subfamilies (UGT1, UGT2, UGT3 and
UGT8) that encodes 22 functional enzymes. UGTs are critical for the metabolism and …

The miR‐282‐5p regulates larval moulting process by targeting chitinase 5 in Bombyx mori

Y Wang, H Zou, J Lai, Z Zhang… - Insect molecular …, 2022 - Wiley Online Library
Moulting is critical for growth, development and survival in insects. As the main components
of cuticle, dynamic change of chitin is consistent with the moulting process. Chitinase is the …