Bacteriophage-based advanced bacterial detection: Concept, mechanisms, and applications
Some bacterial species are deadly disease-causing pathogens with high morbidity and
mortality in humans worldwide. Key interfaces in the transmission of bacterial pathogens …
mortality in humans worldwide. Key interfaces in the transmission of bacterial pathogens …
Integrating viral metagenomics into an ecological framework
Viral metagenomics has expanded our knowledge of the ecology of uncultured viruses,
within both environmental (eg, terrestrial and aquatic) and host-associated (eg, plants and …
within both environmental (eg, terrestrial and aquatic) and host-associated (eg, plants and …
Species-and site-specific genome editing in complex bacterial communities
Understanding microbial gene functions relies on the application of experimental genetics in
cultured microorganisms. However, the vast majority of bacteria and archaea remain …
cultured microorganisms. However, the vast majority of bacteria and archaea remain …
High-throughput mapping of the phage resistance landscape in E. coli
Bacteriophages (phages) are critical players in the dynamics and function of microbial
communities and drive processes as diverse as global biogeochemical cycles and human …
communities and drive processes as diverse as global biogeochemical cycles and human …
Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
Tailocins are bactericidal protein complexes produced by a wide variety of bacteria that kill
closely related strains and may play a role in microbial community structure. Thanks to their …
closely related strains and may play a role in microbial community structure. Thanks to their …
Targeted genome editing of bacteria within microbial communities
Knowledge of microbial gene functions comes from manipulating the DNA of individual
species in isolation from their natural communities. While this approach to microbial genetics …
species in isolation from their natural communities. While this approach to microbial genetics …
[PDF][PDF] Functional screens of barcoded expression libraries uncover new gene functions in carbon utilization among gut Bacteroidales
A mechanistic understanding of host-microbe interactions in the gut microbiome is hindered
by poorly annotated bacterial genomes. While functional genomics can generate large gene …
by poorly annotated bacterial genomes. While functional genomics can generate large gene …
Identification of Receptor Binding Proteins in Flagellotropic Agrobacterium Phage 7-7-1
F Gonzalez, BE Scharf - Viruses, 2021 - mdpi.com
The rapid discovery of new and diverse bacteriophages has driven the innovation of
approaches aimed at detailing interactions with their bacterial hosts. Previous studies on …
approaches aimed at detailing interactions with their bacterial hosts. Previous studies on …
Deciphering microbial metal toxicity responses via random bar code transposon site sequencing and activity-based metabolomics
MP Thorgersen, J Xue, ELW Majumder… - Applied and …, 2021 - Am Soc Microbiol
To uncover metal toxicity targets and defense mechanisms of the facultative anaerobe
Pantoea sp. strain MT58 (MT58), we used a multiomic strategy combining two global …
Pantoea sp. strain MT58 (MT58), we used a multiomic strategy combining two global …
Barcoded overexpression screens in gut Bacteroidales identify genes with roles in carbon utilization and stress resistance
A mechanistic understanding of host-microbe interactions in the gut microbiome is hindered
by poorly annotated bacterial genomes. While functional genomics can generate large gene …
by poorly annotated bacterial genomes. While functional genomics can generate large gene …