Twelve years into genomic selection in forest trees: climbing the slope of enlightenment of marker assisted tree breeding

D Grattapaglia - Forests, 2022 - mdpi.com
Twelve years have passed since the early outlooks of applying genomic selection (GS) to
forest tree breeding, initially based on deterministic simulations, soon followed by empirical …

Recommendations for choosing the genotyping method and best practices for quality control in crop genome-wide association studies

S Pavan, C Delvento, L Ricciardi, C Lotti, E Ciani… - Frontiers in …, 2020 - frontiersin.org
High-throughput genotyping boosts genome-wide association studies (GWAS) in crop
species, leading to the identification of single-nucleotide polymorphisms (SNPs) associated …

Plant pangenomes for crop improvement, biodiversity and evolution

M Schreiber, M Jayakodi, N Stein… - Nature Reviews Genetics, 2024 - nature.com
Plant genome sequences catalogue genes and the genetic elements that regulate their
expression. Such inventories further research aims as diverse as mapping the molecular …

The genetic diversity of Ethiopian barley genotypes in relation to their geographical origin

SS Teklemariam, KN Bayissa, A Matros, K Pillen… - PLoS …, 2022 - journals.plos.org
Ethiopia is recognized as a center of diversity for barley, and its landraces are known for the
distinct genetic features compared to other barley collections. The genetic diversity of …

In-depth understanding of the genetic control of stripe rust resistance (Puccinia striiformis f. sp. tritici) induced in wheat (Triticum aestivum) by Trichoderma asperellum …

SM Esmail, GE Omar, AMI Mourad - Plant Disease, 2023 - Am Phytopath Society
Wheat stripe rust (caused by Puccinia striiformis f. tritici Erikss.) causes severe yield losses
worldwide. Due to the continuous appearance of new stripe rust races, resistance has been …

Discovery and fine mapping of Rph28: a new gene conferring resistance to Puccinia hordei from wild barley

M Mehnaz, P Dracatos, A Pham, T March… - Theoretical and Applied …, 2021 - Springer
Key message A new gene Rph28 conferring resistance to barley leaf rust was discovered
and fine-mapped on chromosome 5H from wild barley. Abstract Leaf rust is a highly …

CoreSNP: an efficient pipeline for core marker profile selection from genome-wide SNP datasets in crops

T Dou, C Wang, Y Ma, Z Chen, J Zhang, G Guo - BMC Plant Biology, 2023 - Springer
Background DNA marker profiles play a crucial role in the identification and registration of
germplasm, as well as in the distinctness, uniformity, and stability (DUS) testing of new plant …

Overcoming barriers to the registration of new plant varieties under the DUS system

CJ Yang, J Russell, L Ramsay, W Thomas… - Communications …, 2021 - nature.com
Abstract Distinctness, Uniformity and Stability (DUS) is an intellectual property system
introduced in 1961 by the International Union for the Protection of New Varieties of Plants …

Optimizing genomic-enabled prediction in small-scale maize hybrid breeding programs: a roadmap review

R Fritsche-Neto, G Galli, KLR Borges… - Frontiers in Plant …, 2021 - frontiersin.org
The usefulness of genomic prediction (GP) for many animal and plant breeding programs
has been highlighted for many studies in the last 20 years. In maize breeding programs …

Suitability of single-nucleotide polymorphism arrays versus genotyping-by-sequencing for genebank genomics in wheat

J Chu, Y Zhao, S Beier, AW Schulthess… - Frontiers in Plant …, 2020 - frontiersin.org
Genebank genomics promises to unlock valuable diversity for plant breeding but first, one
key question is which marker system is most suitable to fingerprint entire genebank …