Fundamentals and methods for T‐and B‐cell epitope prediction

JL Sanchez-Trincado… - Journal of …, 2017 - Wiley Online Library
Adaptive immunity is mediated by T‐and B‐cells, which are immune cells capable of
developing pathogen‐specific memory that confers immunological protection. Memory and …

Epitope-based vaccine design: a comprehensive overview of bioinformatics approaches

S Parvizpour, MM Pourseif, J Razmara, MA Rafi… - Drug Discovery …, 2020 - Elsevier
Highlights•Epitope vaccines provide maximal therapeutic efficacy with minimal side
effects.•Reverse vaccinology can be used for designing epitope vaccines.•Computational …

Immunoinformatics and vaccine development: an overview

AN Oli, WO Obialor, MO Ifeanyichukwu… - ImmunoTargets and …, 2020 - Taylor & Francis
The use of vaccines have resulted in a remarkable improvement in global health. It has
saved several lives, reduced treatment costs and raised the quality of animal and human …

A guide to current methodology and usage of reverse vaccinology towards in silico vaccine discovery

SJ Goodswen, PJ Kennedy… - FEMS Microbiology …, 2023 - academic.oup.com
Reverse vaccinology (RV) was described at its inception in 2000 as an in silico process that
starts from the genomic sequence of the pathogen and ends with a list of potential protein …

Vaxign2: the second generation of the first Web-based vaccine design program using reverse vaccinology and machine learning

E Ong, MF Cooke, A Huffman, Z Xiang… - Nucleic acids …, 2021 - academic.oup.com
Vaccination is one of the most significant inventions in medicine. Reverse vaccinology (RV)
is a state-of-the-art technique to predict vaccine candidates from pathogen's genome (s). To …

Vaxign-ML: supervised machine learning reverse vaccinology model for improved prediction of bacterial protective antigens

E Ong, H Wang, MU Wong, M Seetharaman… - …, 2020 - academic.oup.com
Motivation Reverse vaccinology (RV) is a milestone in rational vaccine design, and machine
learning (ML) has been applied to enhance the accuracy of RV prediction. However, ML …

Comparison of open-source reverse vaccinology programs for bacterial vaccine antigen discovery

M Dalsass, A Brozzi, D Medini, R Rappuoli - Frontiers in immunology, 2019 - frontiersin.org
Reverse Vaccinology (RV) is a widely used approach to identify potential vaccine
candidates (PVCs) by screening the proteome of a pathogen through computational …

Designing a Recombinant Vaccine against Providencia rettgeri Using Immunoinformatics Approach

S Gul, S Ahmad, A Ullah, S Ismail, M Khurram… - Vaccines, 2022 - mdpi.com
Antibiotic resistance (AR) is the resistance mechanism pattern in bacteria that evolves over
some time, thus protecting the bacteria against antibiotics. AR is due to bacterial evolution to …

Immunoinformatics-Aided Design and Evaluation of a Potential Multi-Epitope Vaccine against Klebsiella Pneumoniae

HA Dar, T Zaheer, M Shehroz, N Ullah, K Naz… - Vaccines, 2019 - mdpi.com
Klebsiella pneumoniae is an opportunistic gram-negative bacterium that causes nosocomial
infection in healthcare settings. Despite the high morbidity and mortality rate associated with …

In Silico Prediction of a Multitope Vaccine against Moraxella catarrhalis: Reverse Vaccinology and Immunoinformatics

MA Soltan, N Elbassiouny, H Gamal, EB Elkaeed… - Vaccines, 2021 - mdpi.com
Moraxella catarrhalis (M. catarrhalis) is a Gram-negative bacterium that can cause serious
respiratory tract infections and middle ear infections in children and adults. M. catarrhalis …