Exploring free-energy landscapes of intrinsically disordered proteins at atomic resolution using NMR spectroscopy

MR Jensen, M Zweckstetter, J Huang… - Chemical …, 2014 - ACS Publications
The last 15 years have seen a paradigm shift in our understanding of protein biochemistry,
with the realization that an unexpectedly high fraction of the human genome codes for …

Conformational ensembles of intrinsically disordered proteins and flexible multidomain proteins

FE Thomasen, K Lindorff-Larsen - Biochemical Society …, 2022 - portlandpress.com
Intrinsically disordered proteins (IDPs) and multidomain proteins with flexible linkers show a
high level of structural heterogeneity and are best described by ensembles consisting of …

Atomic-level structure determination of amorphous molecular solids by NMR

M Cordova, P Moutzouri, SO Nilsson Lill… - Nature …, 2023 - nature.com
Abstract Structure determination of amorphous materials remains challenging, owing to the
disorder inherent to these materials. Nuclear magnetic resonance (NMR) powder …

ODiNPred: comprehensive prediction of protein order and disorder

R Dass, FAA Mulder, JT Nielsen - Scientific Reports, 2020 - nature.com
Structural disorder is widespread in eukaryotic proteins and is vital for their function in
diverse biological processes. It is therefore highly desirable to be able to predict the degree …

[HTML][HTML] NMR contributions to structural dynamics studies of intrinsically disordered proteins

R Konrat - Journal of Magnetic Resonance, 2014 - Elsevier
Intrinsically disordered proteins (IDPs) are characterized by substantial conformational
plasticity. Given their inherent structural flexibility X-ray crystallography is not applicable to …

POTENCI: prediction of temperature, neighbor and pH-corrected chemical shifts for intrinsically disordered proteins

JT Nielsen, FAA Mulder - Journal of biomolecular NMR, 2018 - Springer
Chemical shifts contain important site-specific information on the structure and dynamics of
proteins. Deviations from statistical average values, known as random coil chemical shifts …

Structural characterization of intrinsically disordered proteins by NMR spectroscopy

S Kosol, S Contreras-Martos, C Cedeño, P Tompa - Molecules, 2013 - mdpi.com
Recent advances in NMR methodology and techniques allow the structural investigation of
biomolecules of increasing size with atomic resolution. NMR spectroscopy is especially well …

Visualizing the molecular recognition trajectory of an intrinsically disordered protein using multinuclear relaxation dispersion NMR

R Schneider, D Maurin, G Communie… - Journal of the …, 2015 - ACS Publications
Despite playing important roles throughout biology, molecular recognition mechanisms in
intrinsically disordered proteins remain poorly understood. We present a combination of …

Features of molecular recognition of intrinsically disordered proteins via coupled folding and binding

J Yang, M Gao, J Xiong, Z Su, Y Huang - Protein Science, 2019 - Wiley Online Library
The sequence–structure–function paradigm of proteins has been revolutionized by the
discovery of intrinsically disordered proteins (IDPs) or intrinsically disordered regions (IDRs) …

FuzDB: a new phase in understanding fuzzy interactions

A Hatos, AM Monzon, SCE Tosatto… - Nucleic acids …, 2022 - academic.oup.com
Fuzzy interactions are specific, variable contacts between proteins and other biomolecules
(proteins, DNA, RNA, small molecules) formed in accord to the cellular context. Fuzzy …