[HTML][HTML] Visualization of macromolecular structures

SI O'donoghue, DS Goodsell, AS Frangakis… - Nature …, 2010 - nature.com
Structural biology is rapidly accumulating a wealth of detailed information about protein
function, binding sites, RNA, large assemblies and molecular motions. These data are …

Free resources to assist structure-based virtual ligand screening experiments

BO Villoutreix, N Renault, D Lagorce… - Current Protein and …, 2007 - ingentaconnect.com
In today's research environment, a wealth of experimental/theoretical structural data is
available and the number of therapeutically relevant macromolecular structures is growing …

A workflow for mutation extraction and structure annotation

R Kanagasabai, KH Choo, S Ranganathan… - … of Bioinformatics and …, 2007 - World Scientific
Rich information on point mutation studies is scattered across heterogeneous data sources.
This paper presents an automated workflow for mining mutation annotations from full-text …

Deploying mutation impact text-mining software with the SADI Semantic Web Services framework

A Riazanov, JB Laurila, CJO Baker - BMC bioinformatics, 2011 - Springer
Background Mutation impact extraction is an important task designed to harvest relevant
annotations from scientific documents for reuse in multiple contexts. Our previous work on …

A pragmatic approach to cooperative communication

DK Lee, KM Chugg - MILCOM 2006-2006 IEEE Military …, 2006 - ieeexplore.ieee.org
Cooperative communication represents an effective way of introducing spatial diversity in
wireless networks. Full performance gain of an ideal cooperative communication system …

Interpreting the omics 'era'data

GA Pavlopoulos, E Iacucci, I Iliopoulos… - Multimedia Services in …, 2013 - Springer
The analysis and the interpretation of the complex and dynamic biological systems has
become a major bottleneck nowadays. The latest high-throughput “omics” approaches, such …

Enhanced semantic access to the protein engineering literature using ontologies populated by text mining

R Witte, T Kappler, CJO Baker - International journal of …, 2007 - inderscienceonline.com
The biomedical literature is growing at an ever-increasing rate, which pronounces the need
to support scientists with advanced, automated means of accessing knowledge. We …

Structural bioinformatics: from the sequence to structure and function

M Wiltgen - Current Bioinformatics, 2009 - ingentaconnect.com
Proteins are the molecules of life which are involved in cellular processes. The functional
specificity of a protein is linked to its structure. A great section of bioinformatics deals with the …

Sequence–structure relationship study in all-α transmembrane proteins using an unsupervised learning approach

J Esque, A Urbain, C Etchebest, AG de Brevern - Amino acids, 2015 - Springer
Transmembrane proteins (TMPs) are major drug targets, but the knowledge of their precise
topology structure remains highly limited compared with globular proteins. In spite of the …

ProSAT+: visualizing sequence annotations on 3D structure

A Stank, S Richter, RC Wade - Protein Engineering, Design and …, 2016 - academic.oup.com
Pro tein S tructure A nnotation T ool-plus (ProSAT+) is a new web server for mapping protein
sequence annotations onto a protein structure and visualizing them simultaneously with the …